ese5934_project

BART Installation

To install BART, please refer to https://mrirecon.github.io/bart/ . You download their release and then run make to compile the code. For redhat based system and mac os I have tested that it works. For windows, you may need to use WSL or other linux environment to compile the code.

Denpendency Installation

Too install all the dependency, we recommend using poetry as dependency manager.

Peotry Installation

Run following code to install poetry

curl -sSL https://install.python-poetry.org | python3 -

then add $HOME/.local/bin to your PATH (example code is given for bash, you may need to find out how to do it for your own shell):

echo 'export PATH=$PATH:$HOME/.local/bin' >> ~/.bashrc

and then open a new shell and try

poetry --version

if it return something like Poetry (version 1.2.0), your install is ready.

Then just run in this repo's folder

poetry install

it will automatically install all the dependency.

Poetry Add Dependency

For example if you want to add nibabel to the denpendency just run

poetry add nibabel

Poetry Detailed

For more information please refer to https://python-poetry.org/docs/

testing change by mahshid