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Galaxy/Bioconductor shiny hackathon blog post #2742

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merged 9 commits into from
Aug 22, 2024
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hrhotz
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@hrhotz hrhotz commented Aug 21, 2024

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hrhotz commented Aug 21, 2024

ping @csoneson @federicomarini @bgruening

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hrhotz commented Aug 21, 2024

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wrt to "ToDo" part: maybe a link to https://training.galaxyproject.org/training-material/topics/dev/tutorials/interactive-tools/tutorial.html is sufficient ?

Das tönt gut!

---
title: 'Hosting R/Shiny applications on Galaxy (and other frameworks)'
date: '2024-08-21'
tease: "Thanks to the outcome of a small Galaxy/Bioconductor hackathon earlier this year, it has become much easier to deploy a Shiny phyloseq App as an interactive tool (IT) on usegalaxy.eu"

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Should this be more general (i.e. not specifically for phyloseq)? E.g.
"Thanks to the outcome of a small Galaxy/Bioconductor hackathon earlier this year, it has become much easier to deploy Shiny applications as interactive tools (ITs) on usegalaxy.eu"

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looks like this is a typo from my side....I will fix it

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ah, the github wizard has already done it - Thanks

Using this Dockerfile, the template shiny application can be dockerized


Once the Shiny-App Docker container is created and publicly available to everyone, it can be integrated into Galaxy. The process is very similar to the integration of a normal Galaxy tool and [described in the GTN](https://training.galaxyproject.org/training-material/topics/dev/tutorials/interactive-tools/tutorial.html). Alternatively you can drop us a message in our [Galaxy Tool Chat](https://matrix.to/#/#galaxy-iuc_iuc:gitter.im) or create a [new issue](https://github.com/galaxyproject/tools-iuc/issues/new) to inform us about your new App. We will try to integrate it for you and deploy if on the European Galaxy server.

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"...and deploy if..." -> "...and deploy it..."

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fixed

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Looks good to me!

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hrhotz commented Aug 22, 2024

we can merge....

@bgruening bgruening changed the title WIP: Galaxy/Bioconductor shiny hackathon blog post Galaxy/Bioconductor shiny hackathon blog post Aug 22, 2024
@bgruening bgruening merged commit 2141f40 into master Aug 22, 2024
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@bgruening bgruening deleted the hrhotz-patch-1 branch August 22, 2024 09:02
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3 participants