Merge pull request #29209 from geneontology/issue-28523-2

fixed xef for #28523

src/ontology/go-edit.obo

@@ -98060,11 +98060,12 @@ intersection_of: has_primary_output CHEBI:14321 ! glutamate(1-)
 id: GO:0010134
 name: sulfate assimilation via adenylyl sulfate reduction
 namespace: biological_process
-def: "The pathway by which inorganic sulfate is activated, reduced and incorporated into sulfated compounds, where the activated sulfate, adenylyl-sulfate, is reduced to sulfite by the activity of adenylyl-sulfate reductase." [EC:1.8.99.2]
+def: "The pathway by which inorganic sulfate is activated, reduced and incorporated into sulfated compounds, where the activated sulfate, adenylyl-sulfate, is reduced to sulfite by the activity of adenylyl-sulfate reductase." [MetaCyc:SULFMETII-PWY]
 synonym: "sulphate assimilation via adenylyl sulphate reduction" EXACT []
 xref: MetaCyc:SULFMETII-PWY
 intersection_of: GO:0000103 ! sulfate assimilation
 intersection_of: has_part GO:0009973 ! adenylyl-sulfate reductase activity
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/pull/29161" xsd:anyURI
 
 [Term]
 id: GO:0010135
@@ -108582,7 +108583,7 @@ synonym: "PAPS:DSH sulfotransferase activity" RELATED [EC:2.8.2.8]
 synonym: "PAPS:N-desulfoheparin sulfotransferase activity" RELATED [EC:2.8.2.8]
 xref: EC:2.8.2.8
 xref: MetaCyc:HEPARITIN-SULFOTRANSFERASE-RXN
-xref: RHEA:21980
+xref: RHEA:21980 {source="skos:exactMatch"}
 is_a: GO:0034483 ! heparan sulfate sulfotransferase activity
 property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28762" xsd:anyURI
 
@@ -430454,10 +430455,11 @@ replaced_by: GO:0018768
 id: GO:0102140
 name: heparan sulfate N-deacetylase activity
 namespace: molecular_function
-def: "Catalysis of the reaction: H2O + [heparan sulfate]-N-acetyl-alpha-D-glucosamine = acetate + H+ + [heparan sulfate]-alpha-D-glucosamine." [EC:3.1.1.-, GOC:pz]
-xref: MetaCyc:RXN-11557
+def: "Catalysis of the reaction: H2O + [heparan sulfate]-N-acetyl-alpha-D-glucosamine = acetate + H+ + [heparan sulfate]-alpha-D-glucosamine." [RHEA:70587]
+xref: RHEA:70587 {source="skos:exactMatch"}
 is_a: GO:0019213 ! deacetylase activity
 is_a: GO:0052689 ! carboxylic ester hydrolase activity
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28523" xsd:anyURI
 
 [Term]
 id: GO:0102141
@@ -438594,8 +438596,9 @@ is_obsolete: true
 id: GO:0103031
 name: L-Ala-D/L-Glu epimerase activity
 namespace: molecular_function
-def: "Catalysis of the reaction: L-alanyl-D-glutamate = L-alanyl-L-glutamate." [EC:5.1.1.-, GOC:pz]
-xref: MetaCyc:RXN0-5228
+def: "Catalysis of the reaction:L-alanyl-L-glutamate = L-alanyl-D-glutamate." [RHEA:28394]
+xref: EC:5.1.1.20 {source="skos:exactMatch"}
+xref: MetaCyc:RXN0-5228 {source="skos:exactMatch"}
 xref: RHEA:28394
 is_a: GO:0016855 ! racemase and epimerase activity, acting on amino acids and derivatives