fix: Update workflow/scripts/sample_mixup_check.py

genomic-medicine-sweden · Oct 1, 2024 · c121a4b · c121a4b
1 parent 3ab78f3
commit c121a4b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/scripts/sample_mixup_check.py b/workflow/scripts/sample_mixup_check.py
@@ -4,7 +4,7 @@
 vcf_dna_filenames = snakemake.input.id_snp_vcf_dna
 vcf_rna_filenames = snakemake.input.id_snp_vcf_rna
 report = open(snakemake.output.mixup_report, "w")
-match_cutoff = snakemake.params.match_cutoff
+match_cutoff = float(snakemake.params.match_cutoff)
 
 vcf_dict_dna = {}
 dna_samples = {}