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ci: update main test file #454

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Apr 26, 2024
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ci: update main test file #454

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56 changes: 28 additions & 28 deletions .tests/jenkins/test_input_main.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -9,13 +9,13 @@ results/dna/HD827_T/additional_files/biomarker/HD827_T.purecn.scarhrd_cnvkit_sco
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results/dna/HD827_T/additional_files/cnv/HD827_T.deletions.tsv e441b862e6d6d573d18fe40f1eaa7103
results/dna/HD827_T/additional_files/cnv/HD827_T.manta_tumorSV.vcf.gz e29abf2c24120cd652bdf6c50b7aab12
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology.amp_all_del_all.cnv_report.tsv 69a3436f01613d49a82dca7aa1828374
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology.amp_all_del_validated.cnv_report.tsv 18297cf54ddee1a0564edbb254620b6e
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology_purecn.amp_all_del_all.cnv_report.tsv b13e1595a1b891bb5a18ec24e51ee748
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology.amp_all_del_all.cnv_report.tsv cabe3be96550c2c8e86f8c4a1779de1f
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology.amp_all_del_validated.cnv_report.tsv 244385d39ffe68fabe5068ae30df123f
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology_purecn.amp_all_del_all.cnv_report.tsv 01660be1832c394b02e87e47e11afd9a
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology_purecn.svdb_query.vcf c4c706c4a72e5d1ecbb3b990bb01b425
results/dna/HD827_T/additional_files/cnv/HD827_T.pathology.svdb_query.vcf 2c73b0b03c88250d4b33db47b3d626e8
results/dna/HD827_T/additional_files/cnv/HD827_T.purecn.amp_all_del_all.cnv_report.tsv b13e1595a1b891bb5a18ec24e51ee748
results/dna/HD827_T/additional_files/cnv/HD827_T.purecn.amp_all_del_validated.cnv_report.tsv 8a9d642420b9e09e2fd8dcc7cb4a196a
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results/dna/HD827_T/additional_files/cnv/HD827_T.purecn.amp_all_del_validated.cnv_report.tsv 83f8461e2ac1537ed67f5fbb48cc6e09
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results/dna/HD827_T/additional_files/qc/HD827_T.alignment_summary_metrics.txt 351f113346779003eae764ab6d16c5c4
results/dna/HD827_T/additional_files/qc/HD827_T.contamination.table 3c9511e7efab4fefd32144ff2ad19d19
Expand All @@ -31,23 +31,23 @@ results/dna/HD827_T/additional_files/vcf/vardict_HD827_T.vcf.gz 8654e74433b4550c
results/dna/HD827_T/biomarker/HD827_T.msisensor_pro.score.tsv 0f65c2525d900c36685c8a6e902e0f18
results/dna/HD827_T/biomarker/HD827_T.pathology_purecn.scarhrd_cnvkit_score.txt 01d2c284e52f514668a1cd55dfc3e972
results/dna/HD827_T/biomarker/HD827_T.TMB.txt daaee4de560681775bff827c15a8bc9b
results/dna/HD827_T/cnv/HD827_T.pathology_purecn.amp_all_del_validated.cnv_report.tsv 8a9d642420b9e09e2fd8dcc7cb4a196a
results/dna/HD827_T/cnv/HD827_T.pathology_purecn.amp_all_del_validated.cnv_report.tsv 83f8461e2ac1537ed67f5fbb48cc6e09
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results/dna/HD827_T/qc/HD827_T.coverage_and_mutations.tsv 8a0e25a13c1c24b1fcb31c6ed0fa30b2
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results/dna/HD832_T/additional_files/biomarker/HD832_T.purecn.scarhrd_cnvkit_score.txt 4b722d55d746bd2b1cc8699ebd97f2ce
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results/dna/HD832_T/additional_files/cnv/HD832_T.manta_tumorSV.vcf.gz 7883b18b87db697f6f4eb0c51fc36ec9
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results/dna/HD832_T/additional_files/qc/HD832_T.alignment_summary_metrics.txt 8b2548b05cc43eaff20aeabb16aa1490
results/dna/HD832_T/additional_files/qc/HD832_T.contamination.table 18bef22a4210099ec22b2444e6ac2482
Expand All @@ -63,23 +63,23 @@ results/dna/HD832_T/additional_files/vcf/vardict_HD832_T.vcf.gz e105f2145cd7ee18
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results/dna/HD832_T/biomarker/HD832_T.TMB.txt 71ff435292edd8cc8613cceef2abab25
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results/dna/NA12878_T/additional_files/biomarker/NA12878_T.purecn.scarhrd_cnvkit_score.txt 7957018a207665c913fbe5a64a8e7607
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results/dna/NA12878_T/additional_files/qc/NA12878_T.contamination.table e2ab7189dcf7c8cfb1f0ac24ac8766dc
Expand All @@ -95,23 +95,23 @@ results/dna/NA12878_T/additional_files/vcf/vardict_NA12878_T.vcf.gz d4b82ab064af
results/dna/NA12878_T/biomarker/NA12878_T.msisensor_pro.score.tsv c6d1341e7c112a01e1dba61e460167ac
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Expand All @@ -127,9 +127,9 @@ results/dna/VAL2022_T/additional_files/vcf/vardict_VAL2022_T.vcf.gz 330c1cde2dac
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