Merge CNV and SV calls #1351

Job	Run time
samplesheet \| docker \| NF-24.04.2	6m 45s
samplesheet_multisample_bam \| docker \| NF-24.04.2	8m 18s
samplesheet_multisample_ont_bam \| docker \| NF-24.04.2	6m 45s
SHORT_VARIANT_CALLING \| docker \| NF-24.04.2	9m 7s
SNV_ANNOTATION \| docker \| NF-24.04.2	3m 46s
CALL_SVS \| docker \| NF-24.04.2	6m 35s
ANNOTATE_SVS \| docker \| NF-24.04.2	2m 14s
RANK_VARIANTS \| docker \| NF-24.04.2	4m 14s
samplesheet \| docker \| NF-latest-everything	6m 35s
samplesheet_multisample_bam \| docker \| NF-latest-everything	8m 12s
samplesheet_multisample_ont_bam \| docker \| NF-latest-everything	6m 44s
SHORT_VARIANT_CALLING \| docker \| NF-latest-everything	8m 49s
SNV_ANNOTATION \| docker \| NF-latest-everything	3m 51s
CALL_SVS \| docker \| NF-latest-everything	6m 40s
ANNOTATE_SVS \| docker \| NF-latest-everything	2m 2s
RANK_VARIANTS \| docker \| NF-latest-everything	3m 59s
	1h 34m 36s

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