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Add deepvariant_vcfstatsreport #1356

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Add deepvariant_vcfstatsreport

Add deepvariant_vcfstatsreport #1356

Triggered via pull request October 29, 2024 15:15
@fellen31fellen31
opened #446
fellen31:add-deepvariant-vcf-report
Status Failure
Total duration 10m 3s
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ci.yml

on: pull_request
Matrix: test
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22 errors and 32 warnings
ANNOTATE_SVS | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
ANNOTATE_SVS | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SNV_ANNOTATION | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SNV_ANNOTATION | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
RANK_VARIANTS | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
RANK_VARIANTS | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
CALL_SVS | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
CALL_SVS | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
samplesheet_multisample_ont_bam | docker | NF-24.04.2
Process completed with exit code 1.
samplesheet_multisample_ont_bam | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
samplesheet_multisample_ont_bam | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
samplesheet_multisample_ont_bam | docker | NF-latest-everything
Process completed with exit code 1.
samplesheet | docker | NF-24.04.2
Process completed with exit code 1.
samplesheet | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
samplesheet | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
samplesheet | docker | NF-latest-everything
Process completed with exit code 1.
samplesheet_multisample_bam | docker | NF-latest-everything
Process completed with exit code 1.
samplesheet_multisample_bam | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
samplesheet_multisample_bam | docker | NF-24.04.2
Process completed with exit code 1.
samplesheet_multisample_bam | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SHORT_VARIANT_CALLING | docker | NF-24.04.2
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SHORT_VARIANT_CALLING | docker | NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
ANNOTATE_SVS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ANNOTATE_SVS | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
ANNOTATE_SVS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ANNOTATE_SVS | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SNV_ANNOTATION | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SNV_ANNOTATION | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SNV_ANNOTATION | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SNV_ANNOTATION | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
RANK_VARIANTS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
RANK_VARIANTS | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
RANK_VARIANTS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
RANK_VARIANTS | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
CALL_SVS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
CALL_SVS | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
CALL_SVS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
CALL_SVS | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
samplesheet_multisample_ont_bam | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_ont_bam | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
samplesheet_multisample_ont_bam | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_ont_bam | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
samplesheet | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
samplesheet | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
samplesheet_multisample_bam | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_bam | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
samplesheet_multisample_bam | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_bam | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SHORT_VARIANT_CALLING | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SHORT_VARIANT_CALLING | docker | NF-24.04.2
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SHORT_VARIANT_CALLING | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SHORT_VARIANT_CALLING | docker | NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23