Add found_in tag and nf-test to call repeat expansions #1365

Job	Run time
samplesheet \| docker \| NF-24.04.2	6m 11s
samplesheet_multisample_bam \| docker \| NF-24.04.2	7m 50s
samplesheet_multisample_ont_bam \| docker \| NF-24.04.2	6m 26s
SHORT_VARIANT_CALLING \| docker \| NF-24.04.2	9m 25s
SNV_ANNOTATION \| docker \| NF-24.04.2	3m 51s
CALL_SVS \| docker \| NF-24.04.2	6m 42s
ANNOTATE_SVS \| docker \| NF-24.04.2	1m 54s
RANK_VARIANTS \| docker \| NF-24.04.2	3m 57s
CALL_REPEAT_EXPANSIONS \| docker \| NF-24.04.2	1m 9s
samplesheet \| docker \| NF-latest-everything	6m 5s
samplesheet_multisample_bam \| docker \| NF-latest-everything	8m 2s
samplesheet_multisample_ont_bam \| docker \| NF-latest-everything	6m 40s
SHORT_VARIANT_CALLING \| docker \| NF-latest-everything	8m 45s
SNV_ANNOTATION \| docker \| NF-latest-everything	3m 44s
CALL_SVS \| docker \| NF-latest-everything	6m 21s
ANNOTATE_SVS \| docker \| NF-latest-everything	1m 48s
RANK_VARIANTS \| docker \| NF-latest-everything	4m 2s
CALL_REPEAT_EXPANSIONS \| docker \| NF-latest-everything	1m 4s
	1h 33m 56s

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