Refactor reference channels #1382

Job	Run time
samplesheet \| docker \| NF-24.04.2	7m 11s
samplesheet_multisample_bam \| docker \| NF-24.04.2	8m 29s
samplesheet_multisample_ont_bam \| docker \| NF-24.04.2	7m 29s
SHORT_VARIANT_CALLING \| docker \| NF-24.04.2	9m 56s
SNV_ANNOTATION \| docker \| NF-24.04.2	4m 27s
CALL_SVS \| docker \| NF-24.04.2	6m 56s
ANNOTATE_SVS \| docker \| NF-24.04.2	2m 10s
RANK_VARIANTS \| docker \| NF-24.04.2	5m 3s
CALL_REPEAT_EXPANSIONS \| docker \| NF-24.04.2	1m 25s
samplesheet \| docker \| NF-latest-everything	6m 50s
samplesheet_multisample_bam \| docker \| NF-latest-everything	8m 58s
samplesheet_multisample_ont_bam \| docker \| NF-latest-everything	7m 17s
SHORT_VARIANT_CALLING \| docker \| NF-latest-everything	9m 10s
SNV_ANNOTATION \| docker \| NF-latest-everything	4m 15s
CALL_SVS \| docker \| NF-latest-everything	6m 48s
ANNOTATE_SVS \| docker \| NF-latest-everything	2m 13s
RANK_VARIANTS \| docker \| NF-latest-everything	4m 31s
CALL_REPEAT_EXPANSIONS \| docker \| NF-latest-everything	57s
	1h 44m 5s

Provide feedback