Add CNV calling workflow to test profile #146

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Triggered via pull request April 5, 2024 09:03

fellen31

synchronize #68

fellen31:test_cnv_workflow

Status Success

Total duration 7m 59s

Artifacts –

ci.yml

on: pull_request

Matrix: Run pipeline with test data

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4 warnings

Run pipeline with test data (23.04.0)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (--input assets/samplesheet_multisample_bam.csv --split_fastq 250 --p...

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (--input assets/samplesheet_multisample_bam.csv --split_fastq 250 --p...

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.