chore: Update vendored nanoarrow #237
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: test-python | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
paths: | |
- '.github/workflows/python.yaml' | |
- 'src/geoarrow/**' | |
- 'python/**' | |
jobs: | |
test-python: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: [ubuntu-latest] | |
python-version: ['3.8', '3.9', '3.10', '3.11'] | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/checkout@v4 | |
with: | |
repository: geoarrow/geoarrow-python | |
path: geoarrow-python | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache: 'pip' | |
- name: Install (geoarrow-c) | |
run: | | |
pushd python/geoarrow-c | |
pip install ".[test]" | |
- name: Install (geoarrow-pyarrow) | |
run: | | |
pushd geoarrow-python/geoarrow-pyarrow | |
pip install ".[test]" | |
- name: Install (geoarrow-pandas) | |
run: | | |
pushd geoarrow-python/geoarrow-pandas | |
pip install ".[test]" | |
- name: Run tests (geoarrow-c) | |
run: | | |
pytest python/geoarrow-c/tests -v -s | |
- name: Run tests (geoarrow-pyarrow) | |
run: | | |
pytest geoarrow-python/geoarrow-pyarrow/tests -v -s | |
- name: Run tests (geoarrow-pandas) | |
run: | | |
pytest geoarrow-python/geoarrow-pandas/tests -v -s | |
- name: Install coverage dependencies | |
run: | | |
sudo apt-get install -y lcov | |
pip install pytest-cov Cython | |
- name: Install editable | |
run: | | |
pip install -e python/geoarrow-c/ | |
- name: Coverage (geoarrow-c) | |
if: success() && matrix.python-version == '3.11' | |
run: | | |
pushd python/geoarrow-c | |
# Build with Cython + gcc coverage options | |
GEOARROW_COVERAGE=1 python setup.py build_ext --inplace | |
# Run tests | |
python -m pytest --cov ./src/geoarrow .. | |
# Generate xml Python coverage | |
python -m coverage xml | |
# Generate C coverage | |
lcov \ | |
--capture --directory build \ | |
--exclude "/usr/*" \ | |
--exclude "/opt/*" \ | |
--exclude "/Library/*" \ | |
--exclude "*/_lib.cpp" \ | |
--exclude "*/src/geoarrow/c/geoarrow/*" \ | |
--output-file=coverage.info | |
lcov --list coverage.info | |
popd | |
- name: Upload coverage to codecov | |
if: success() && matrix.python-version == '3.11' | |
uses: codecov/codecov-action@v2 | |
with: | |
files: 'python/geoarrow-c/coverage.info,python/geoarrow-c/coverage.xml' | |
- name: Run doctests | |
if: success() && matrix.python-version == '3.11' | |
run: | | |
pushd python/geoarrow-c | |
pytest --pyargs geoarrow.c --doctest-modules |