fix!: Generate child fields as non-nullable (#95) #243
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name: test-python | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
paths: | |
- '.github/workflows/python.yaml' | |
- 'src/geoarrow/**' | |
- 'python/**' | |
jobs: | |
test-python: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: [ubuntu-latest] | |
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache: 'pip' | |
- name: Install (geoarrow-c) | |
run: | | |
pushd python/geoarrow-c | |
pip install ".[test]" | |
- name: Run tests (geoarrow-c) | |
run: | | |
pytest python/geoarrow-c/tests -v -s | |
- name: Install coverage dependencies | |
run: | | |
sudo apt-get install -y lcov | |
pip install pytest-cov Cython | |
- name: Install editable | |
run: | | |
pip install -e python/geoarrow-c/ | |
- name: Coverage (geoarrow-c) | |
if: success() && matrix.python-version == '3.12' | |
run: | | |
pip install setuptools Cython | |
pushd python/geoarrow-c | |
# Build with Cython + gcc coverage options | |
GEOARROW_COVERAGE=1 python setup.py build_ext --inplace | |
# Run tests | |
python -m pytest --cov ./src/geoarrow .. | |
# Generate xml Python coverage | |
python -m coverage xml | |
# Generate C coverage | |
lcov \ | |
--capture --directory build \ | |
--exclude "/usr/*" \ | |
--exclude "/opt/*" \ | |
--exclude "/Library/*" \ | |
--exclude "*/_lib.cpp" \ | |
--exclude "*/src/geoarrow/c/geoarrow/*" \ | |
--output-file=coverage.info | |
lcov --list coverage.info | |
popd | |
- name: Upload coverage to codecov | |
if: success() && matrix.python-version == '3.12' | |
uses: codecov/codecov-action@v2 | |
with: | |
files: 'python/geoarrow-c/coverage.info,python/geoarrow-c/coverage.xml' | |
- name: Run doctests | |
if: success() && matrix.python-version == '3.12' | |
run: | | |
pushd python/geoarrow-c | |
pytest --pyargs geoarrow.c --doctest-modules |