Prepare for 2.2 release - clean up package (#29)

* Prepare for 2.2 release - clean up Following tips from `goodpractice::gp()` output * ♻️Cleanup NAMESPACE * ♻️ Reformat code * 🎨 Reformat some lines to reduce length
glotaran · Dec 25, 2022 · 0fa36e2 · 0fa36e2
1 parent a01c6dc
commit 0fa36e2
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diff --git a/.lintr b/.lintr
@@ -1,5 +1,5 @@
 linters: linters_with_defaults(
-    line_length_linter(120),
+    line_length_linter(80),
     # Nice to haves
     commented_code_linter = NULL,
     object_name_linter=NULL,

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -8,13 +8,16 @@ Authors@R: c(
   )
 Description: Allows specification and fitting of some parameter estimation
     examples inspired by time-resolved spectroscopy via a Shiny GUI.
+URL: https://github.com/glotaran/paramGUI/
 License: GPL (>= 2)
 Depends:
-    fields,
-    R (>= 3.0.0),
+    R (>= 3.0.0)
+Imports:
     shiny,
     shinydashboard,
-    TIMP
+    TIMP,
+    fields
+BugReports: https://github.com/glotaran/paramGUI/issues
 Encoding: UTF-8
 Language: en-US
 LazyData: true

diff --git a/NAMESPACE b/NAMESPACE
@@ -8,8 +8,6 @@ export(runGUI)
 export(simndecay_gen_paramGUI)
 export(spectemp)
 export(startGUI)
-import(shiny)
-import(shinydashboard)
 importFrom(TIMP,calcEhiergaus)
 importFrom(TIMP,compModel)
 importFrom(TIMP,dat)
@@ -36,6 +34,48 @@ importFrom(graphics,matplot)
 importFrom(graphics,mtext)
 importFrom(graphics,par)
 importFrom(graphics,plot)
+importFrom(shiny,HTML)
+importFrom(shiny,actionButton)
+importFrom(shiny,checkboxInput)
+importFrom(shiny,column)
+importFrom(shiny,conditionalPanel)
+importFrom(shiny,div)
+importFrom(shiny,downloadButton)
+importFrom(shiny,downloadHandler)
+importFrom(shiny,fileInput)
+importFrom(shiny,fluidPage)
+importFrom(shiny,fluidRow)
+importFrom(shiny,h4)
+importFrom(shiny,h5)
+importFrom(shiny,helpText)
+importFrom(shiny,icon)
+importFrom(shiny,isolate)
+importFrom(shiny,numericInput)
+importFrom(shiny,observe)
+importFrom(shiny,observeEvent)
+importFrom(shiny,plotOutput)
+importFrom(shiny,reactiveValues)
+importFrom(shiny,renderPlot)
+importFrom(shiny,renderPrint)
+importFrom(shiny,selectInput)
+importFrom(shiny,setProgress)
+importFrom(shiny,shinyApp)
+importFrom(shiny,tabPanel)
+importFrom(shiny,tabsetPanel)
+importFrom(shiny,textInput)
+importFrom(shiny,updateTabsetPanel)
+importFrom(shiny,updateTextInput)
+importFrom(shiny,verbatimTextOutput)
+importFrom(shiny,withProgress)
+importFrom(shinydashboard,dashboardBody)
+importFrom(shinydashboard,dashboardHeader)
+importFrom(shinydashboard,dashboardPage)
+importFrom(shinydashboard,dashboardSidebar)
+importFrom(shinydashboard,dropdownMenu)
+importFrom(shinydashboard,messageItem)
+importFrom(shinydashboard,notificationItem)
+importFrom(shinydashboard,renderMenu)
+importFrom(shinydashboard,tabBox)
 importFrom(stats,dnorm)
 importFrom(stats,nls)
 importFrom(stats,nls.control)

diff --git a/R/paramGUI-package.R b/R/paramGUI-package.R
@@ -4,6 +4,15 @@
 #' @description Allows specification and fitting of some parameter estimation
 #' examples inspired by time-resolved spectroscopy via a Shiny GUI.
 #' @docType package
-#' @import shiny shinydashboard
 #' @importFrom TIMP initModel fitModel
+#' @importFrom shiny actionButton checkboxInput column conditionalPanel div
+#' @importFrom shiny downloadButton downloadHandler fileInput fluidRow fluidPage
+#' @importFrom shiny h4 h5 helpText HTML icon isolate numericInput
+#' @importFrom shiny observe observeEvent plotOutput reactiveValues
+#' @importFrom shiny renderPlot renderPrint selectInput setProgress withProgress
+#' @importFrom shiny shinyApp tabPanel tabsetPanel textInput
+#' @importFrom shiny updateTabsetPanel updateTextInput verbatimTextOutput
+#' @importFrom shinydashboard dashboardBody dashboardHeader dashboardPage
+#' @importFrom shinydashboard dashboardSidebar dropdownMenu messageItem
+#' @importFrom shinydashboard notificationItem renderMenu tabBox
 NULL