Online: https://doi.org/10.1172/jci.insight.176963
This is the codebase to replicate key results from Rabadam et al. The datasets presented in this study are deposited in the CZ CELLxGENE Discover resource as “CITEseq of JDM PBMCs” for download and in an interactive format.
Vignettes that walk you through the computational analysis are available here [Github Docs].
Murrow, ..., Rabadam, et al. Cell Systems, 2022. https://doi.org/10.1016/j.cels.2022.06.005
Source code: https://github.com/lmurrow/DECIPHER-seq
The remaining sections are devoted to "translating" the work presented in the paper into short summaries tailored to various technical backgrounds, each with a few suggestions for key follow-up reading as well as recommended starting points in the vignettes.
