Notable changes made:
- When an ordered factor is supplied to the
groups
argument ofcompare_groups
, the order of levels is used to arrange the results. This can be used to change the order of groups when the output is used withheat_tree_matrix
(issue #323). - Added
calc_diff_abund_deseq2
function to use DESeq2 to produce output likecompare_group
useful forheat_tree_matrix
- Fixed error with
primersearch
andprimersearch_raw
when there is a single match to a single query (issue #326) - Fixed
Error in grid.Call.graphics(C_setviewport, vp, TRUE) : non-finite location and/or size for viewport
when usingheat_tree_matrix
with only a single comparison. Now a single differential heat tree is made instead of a matrix #328). - Replace use of depreciated
n_extra
inprint
.