Add model annotations

gyorilab · Jul 8, 2023 · da7159c · da7159c
1 parent cdf3dc2
commit da7159c
Showing 1 changed file with 4 additions and 1 deletion.
diff --git a/notebooks/hackathon_2023.07/scenario1.ipynb b/notebooks/hackathon_2023.07/scenario1.ipynb
@@ -111,7 +111,8 @@
     "    templates=templates,\n",
     "    parameters=parameters,\n",
     "    initials=initials,\n",
-    "    time=Time(name='t', units=day_units)\n",
+    "    time=Time(name='t', units=day_units),\n",
+    "    annotations=Annotations(name='Scenario 1a')\n",
     ")\n",
     "AskeNetPetriNetModel(Model(tm)).to_json_file('scenario1_a.json')"
    ]
@@ -141,6 +142,7 @@
     "parameters['t_1'] = Parameter(name='t_1', value=154, units=day_units)\n",
     "parameters['beta_nc'] = Parameter(name='beta_nc', value=0.5)\n",
     "tm.parameters = parameters\n",
+    "tm.annotations = Annotations(name='Scenario 1c')\n",
     "m_2 = (beta_s - beta_c) / (1 + sympy.exp(-k_1*(t_0-t))) + (beta_c - beta_nc) / (1 + sympy.exp(-k_2*(t_1-t))) + beta_nc"
    ]
   },
@@ -207,6 +209,7 @@
     "epsilon = sympy.Symbol('epsilon')\n",
     "parameters['epsilon'] = Parameter(name='epsilon', value=1/90)\n",
     "tm.parameters = parameters\n",
+    "tm.annotations = Annotations(name='Scenario 1d')\n",
     "t5 = NaturalConversion(subject=c['R'],\n",
     "                       outcome=c['S'],\n",
     "                       rate_law=epsilon*R)"