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MIRA v0.7.0

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@bgyori bgyori released this 17 Jul 14:09
· 176 commits to main since this release
65ff736

What's Changed

  • New features in rate law settings and ODE simulation + photosynthesis model by @bgyori in #316
  • Handle superscripts in expressions by @bgyori in #317
  • Recursively reason over flow control relationships by @cthoyt in #302
  • Evaluation epi scenario 1 example model by @kkaris in #315
  • Move evaluation notebooks into dedicated folders by @bgyori in #318
  • Update evaluation 2024.03 epi scenario 4 notebook by @nanglo123 in #319
  • Update way in which we identify controllers for rate laws when importing from Vensim by @nanglo123 in #320
  • Evaluation scenario 2 by @bgyori in #323
  • Eval sc1 initials by @kkaris in #324
  • Add evaluation scenario 3 notebook and model by @bgyori in #326
  • Create Notebook for evaluation2024.03 epi_scenario_1 model b by @nanglo123 in #321
  • Add control variables to the mapping of parameters for a MIRA template model ingested from a Vensim model by @nanglo123 in #327
  • Fix multiple stratification of templates with excluded concepts by @bgyori in #330
  • Add support for sbml qual models by @nanglo123 in #328
  • Reimplement stratification logic for parameter consistency by @bgyori in #332
  • Add visualization for DKG relations by @nanglo123 in #333
  • Fix dkg viz edge naming by @nanglo123 in #334
  • Change link for budyko-sellers decapode example by @nanglo123 in #337
  • Rename templates during stratification by @bgyori in #338
  • Implement model composition by @nanglo123 in #335
  • Fix serialization for datetime by @nanglo123 in #340
  • Extend DKG Instance by @nanglo123 in #342
  • Adjust test that are affected by the sympy 1.13 update by @nanglo123 in #343

Full Changelog: 0.6.0...0.7.0