An automated Snakemake workflow for comprehensive taxonomic and functional analysis of microbiome sequences. The pipeline utilizes DIAMOND for rapid alignment of short reads or contigs or ORFs and MEGAN for subsequent taxonomic and functional interpretation of the alignment results.
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An automated Snakemake workflow for comprehensive taxonomic and functional analysis of microbiome sequences. The pipeline utilizes DIAMOND for rapid alignment of short reads or contigs or ORFs and MEGAN for subsequent taxonomic and functional interpretation of the alignment results.
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hackerzone85/Microbiome_Analysis_DIAMOND_MEGAN_Pipeline
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An automated Snakemake workflow for comprehensive taxonomic and functional analysis of microbiome sequences. The pipeline utilizes DIAMOND for rapid alignment of short reads or contigs or ORFs and MEGAN for subsequent taxonomic and functional interpretation of the alignment results.
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