Releases: haddocking/haddock-runner
Releases · haddocking/haddock-runner
v1.10.1
What's Changed
- Bump golang.org/x/text from 0.16.0 to 0.17.0 by @dependabot in #123
- minor doc update by @rvhonorato in #124
- Don't allow SLURM scheduler to be used together with
mode=batch
by @rvhonorato in #125
Full Changelog: v1.10.0...v1.10.1
v1.10.0
What's Changed
- Sort the job array by scenario by @rvhonorato in #121
Full Changelog: v1.9.0...v1.10.0
v1.9.0
What's Changed
- Raise error if module is not found in haddock3 installation by @rvhonorato in #118
- Added missing ilrmsdmatrix module by @amjjbonvin in #116
- Bump github.com/go-test/deep from 1.1.0 to 1.1.1 by @dependabot in #113
- Bump github.com/golang/glog from 1.2.1 to 1.2.2 by @dependabot in #114
- Update go-releaser and setup-go actions by @rvhonorato in #119
New Contributors
- @amjjbonvin made their first contribution in #116
Full Changelog: v1.8.1...v1.9.0
v1.8.1
What's Changed
- Bump golang.org/x/text from 0.15.0 to 0.16.0 by @dependabot in #110
- fix typo in
MODEL
header by @rvhonorato in #111 - bump version to v1.8.1 by @rvhonorato in #112
Full Changelog: v1.8.0...v1.8.1
v1.8.0
What's Changed
- Bump github.com/golang/glog from 1.1.2 to 1.2.0 by @dependabot in #93
- Add devcontainer with SLURM by @rvhonorato in #94
- Add SLURM interface by @rvhonorato in #96
- Fix linting issues by @rvhonorato in #97
- Rolling submission by @rvhonorato in #100
- Add arguments to
CreateJobHeader
by @rvhonorato in #101 - Add
mdbook
by @rvhonorato in #102 - Create
mdbook.yml
by @rvhonorato in #103 - Port docs from
haddocking.github.io
by @rvhonorato in #104 - Update docs by @rvhonorato in #105
- Bump github.com/golang/glog from 1.2.0 to 1.2.1 by @dependabot in #106
- Bump golang.org/x/text from 0.14.0 to 0.15.0 by @dependabot in #107
- add
restarting-a-benchmark.md
by @rvhonorato in #108 - update version constant to v1.8.0 by @rvhonorato in #109
Full Changelog: v1.7.0...v1.8.0
v1.7.0
Feature
This version implements a restart feature.
I1116 13:28:09.721754 58085 main.go:192] ############################################
W1116 13:28:09.721797 58085 main.go:207] +++ 2OOB_true-interface is INCOMPLETE - restarting +++
I1116 13:28:09.721810 58085 main.go:204] 1GGR_center-of-mass - DONE - skipping
I1116 13:28:09.721823 58085 main.go:204] 1A2K_random-restraints - DONE - skipping
W1116 13:28:09.721988 58085 main.go:207] +++ 1GGR_true-interface is INCOMPLETE - restarting +++
I1116 13:28:09.721999 58085 main.go:204] 1GGR_random-restraints - DONE - skipping
I1116 13:28:09.722030 58085 main.go:204] 1A2K_center-of-mass - DONE - skipping
I1116 13:28:09.722010 58085 main.go:204] 1PPE_random-restraints - DONE - skipping
W1116 13:28:09.722072 58085 main.go:207] +++ 1PPE_true-interface is INCOMPLETE - restarting +++
W1116 13:28:09.722087 58085 main.go:207] +++ 1A2K_true-interface is INCOMPLETE - restarting +++
I1116 13:28:09.722165 58085 main.go:204] 1PPE_center-of-mass - DONE - skipping
I1116 13:28:09.722041 58085 main.go:204] 2OOB_center-of-mass - DONE - skipping
I1116 13:28:09.722483 58085 main.go:204] 2OOB_random-restraints - DONE - skipping
I1116 13:28:57.531951 58085 main.go:226] 2OOB_true-interface - DONE in 47.81 seconds
I1116 13:29:46.939726 58085 main.go:226] 1GGR_true-interface - DONE in 97.22 seconds
I1116 13:29:56.830500 58085 main.go:226] 1PPE_true-interface - DONE in 107.11 seconds
I1116 13:30:40.741859 58085 main.go:226] 1A2K_true-interface - DONE in 151.02 seconds
I1116 13:30:40.741907 58085 main.go:235] ############################################
If for some reason your benchmarking is interrupted, you can now re-run the haddock-runner
and it will continue from where it stopped.
To make sure the results are consistent, it will create a checksum of both the configuration yaml
and of the input txt
and show you a warning. This ensures that parameters and input has not changed mid-execution.
Thanks @VGPReys for the input about this 👍🏽
What's Changed
- Bump golang.org/x/text from 0.13.0 to 0.14.0 by @dependabot in #89
- Create checksum of key files by @rvhonorato in #90
- Identify the run state by @rvhonorato in #91
- Prepare release v1.7.0 by @rvhonorato in #92
Full Changelog: v1.6.5...v1.7.0
v1.6.5
What's Changed
- update tbl regex for LoadDataset by @rvhonorato in #85
- bump version by @rvhonorato in #86
Full Changelog: v1.6.4...v1.6.5
v1.6.4
What's Changed
- add devcontainer.json by @rvhonorato in #73
- Improve
LoadHaddock3Params
by @rvhonorato in #82 - update version by @rvhonorato in #83
Full Changelog: v1.6.3...v1.6.4
v1.6.3
What's Changed
- Improve pattern detection in
WriteRunToml
by @rvhonorato in #78 - Refactor
fname
matching by @rvhonorato in #80
Full Changelog: v1.6.2...v1.6.3
v1.6.2
What's Changed
- Bump golang.org/x/text from 0.12.0 to 0.13.0 by @dependabot in #70
- replace
strings.Containts
byregex.MatchString
inLoadDataset
by @rvhonorato in #72 - Ignore
cg
input by @rvhonorato in #75 - Bump version by @rvhonorato in #76
Full Changelog: v1.6.1...v1.6.2