purple-v2.34
·
16347 commits
to master
since this release
Added driver catalog to file output
Purity sunrise plot now supports somatic inferred purity
Additional BAF inferring rule
Removed GERMLINE_AMPLIFICATION copy number method.
Added NON_DIPLOID copy number method. This uses the ref normalised tumor copy number (adjusted for observed normal ratio rather than ideal).
Only extend long arm copy numbers to unknown regions of chromosomes 13-15,21,22
Use read count structural variant inferring logic when VAF = 1