Github repo from the manuscript "Pathogenic variants damage cell compositions and single cell transcription in cardiomyopathies".
All scripts from the paper are collected in "Scripts".
Link to publication: https://www.science.org/doi/10.1126/science.abo1984
Data are available via: Raw data/bams: https://ega-archive.org/studies/EGAS00001006374
Raw count matrices (and cell-containing barcodes) + Objects with cell type and state annotation of all barcodes with RAW UMI counts as h5ad (global_all_ANNOTATED_CELLSTATES_RAW_V8): https://zenodo.org/record/6962685#.Y5sKYH3MIe4
Processed data/Cellxgene: https://cellxgene.cziscience.com/collections/e75342a8-0f3b-4ec5-8ee1-245a23e0f7cb