Skip to content

Commit

Permalink
formatting
Browse files Browse the repository at this point in the history
  • Loading branch information
michabirklbauer committed Feb 5, 2024
1 parent 6a55133 commit bb847b1
Showing 1 changed file with 2 additions and 3 deletions.
5 changes: 2 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -47,7 +47,7 @@ Results can then be exported by selecting `File > Export > To Microsoft Excel…
```
python pyXlinkViewerExporter_msannika.py result.xlsx -pdb structure.pdb
```
- **Exporting to XLMS-Tools**
- **Exporting to XLMS-Tools**
XLMS-Tools uses the same file format as pyXlinkViewer, therefore the same exporter can be used!
- **Exporting to XMAS (ChimeraX)**
Visualization of MS Annika results works out of the box with .xlsx files exported from Proteome Discoverer.
Expand Down Expand Up @@ -207,8 +207,7 @@ pyXlinkViewerExporter_msannika.exe "202001216_nsp8_trypsin_XL_REP1.xlsx" "202001
## Export to [XLMS-Tools](https://gitlab.com/topf-lab/xlms-tools)

[XLMS-Tools](https://gitlab.com/topf-lab/xlms-tools) uses the same input format as [pyXlinkViewer](https://github.com/BobSchiffrin/PyXlinkViewer).
Please use the [pyXlinkViewer exporter](#Export-to-[PyXlinkViewer-for-pyMOL](https://github.com/BobSchiffrin/PyXlinkViewer)) to export your results
for XLMS-Tools.
Please use the [pyXlinkViewer exporter](#export-to-pyxlinkviewer-for-pymol) to export your results to XLMS-Tools format.

## Export to [XMAS for ChimeraX](https://github.com/ScheltemaLab/ChimeraX_bundle)

Expand Down

0 comments on commit bb847b1

Please sign in to comment.