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Shiny‐based application of interactive Manhattan plots for longitudinal genome‐wide association studies.

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ShinyAIM

The application is hosted on Shinyapps.io here: https://chikudaisei.shinyapps.io/shinyaim/

The application can be run locally with just one command in R software or RStudio:

shiny::runGitHub("ShinyAIM", "whussain2")

After running the above code the required libraries including 'shiny', 'ggplot2', 'dplyr', 'grid', 'plotly', 'manhattanly', and 'forcats' will be automatically installed. These packages can also be installed by running the following code in R or RStudio:

install.packages(c("shiny","ggplot2","dplyr","grid","plotly","manhattanly","forcats"))

Licensing

This shiny code is licensed under Artistic License 2.0. at https://opensource.org/licenses/Artistic-2.0 .
Copyright (c) 2018, Waseem Hussain, code licensed under Artistic License 2.0.

Contact

You may contact the author of this code, Waseem Hussain at [email protected]; [email protected]

DOI

DOI

Manuscript details

The manuscript describing the application is published in Plant Direct Jouranl and can be found here https://doi.org/10.1002/pld3.91

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Shiny‐based application of interactive Manhattan plots for longitudinal genome‐wide association studies.

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