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Update popv.csv #38

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Update popv.csv #38

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b663df1
Update popv.csv
emquardokus Sep 6, 2024
e8440bc
Update popv.csv
emquardokus Sep 6, 2024
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9 changes: 4 additions & 5 deletions crosswalking-tables/popv.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -5,9 +5,9 @@ Author ORCID(s):,0000-0001-7655-4833,,,,,
Reviewer(s):,"Bruce Herr II, Katy Borner",,,,,
Reviewer ORCID(s):,"0000-0002-6703-7647, 0000-0002-3321-6137",,,,,
General Publication(s):,"https://github.com/YosefLab/PopV, 1. Ergen C, Xing G, Xu C, Jayasuriya M, McGeever E, Pisco AO, Streets A, Yosef N. Consensus prediction of cell type labels with popV. bioRxiv [Internet]. 2023 Jan 1;2023.08.18.553912. Available from: http://biorxiv.org/content/early/2023/08/21/2023.08.18.553912.abstract",,,,,
Data DOI:,https://doi.org/10.48539/HBM978.STZB.569,,,,,
Date:,15-Jun-24,,,,,
Version number:,v1.0,,,,,
Data DOI:
Date:
Version number:,v1.1-DRAFT
Organ_Level,Organ_ID,Annotation_Label,Annotation_Label_ID,CL_Label,CL_ID,CL_Match
blood,UBERON:0000178,CD141-positive myeloid dendritic cell,PV:0000001,CD141-positive myeloid dendritic cell,CL:0002394,skos:exactMatch
blood,UBERON:0000178,"CD4-positive, alpha-beta memory T cell",PV:0000002,"CD4-positive, alpha-beta memory T cell",CL:0000897,skos:exactMatch
Expand Down Expand Up @@ -85,7 +85,6 @@ eye,UBERON:0000970,surface ectodermal cell,PV:0000073,surface ectodermal cell,CL
heart,UBERON:0000948,cardiac endothelial cell,PV:0000074,cardiac endothelial cell,CL:0010008,skos:exactMatch
heart,UBERON:0000948,cardiac muscle cell,PV:0000075,cardiac muscle cell,CL:0000746,skos:exactMatch
heart,UBERON:0000948,fibroblast of cardiac tissue,PV:0000076,fibroblast of cardiac tissue,CL:0002548,skos:exactMatch
heart,UBERON:0000948,hepatocyte,PV:0000077,hepatocyte,CL:0000182,skos:exactMatch
heart,UBERON:0000948,macrophage,PV:0000078,macrophage,CL:0000235,skos:exactMatch
heart,UBERON:0000948,smooth muscle cell,PV:0000079,smooth muscle cell,CL:0000192,skos:exactMatch
large intestine,UBERON:0000059,B cell,PV:0000080,B cell,CL:0000236,skos:exactMatch
Expand Down Expand Up @@ -410,4 +409,4 @@ uterus,UBERON:0000995,macrophage,PV:0000398,macrophage,CL:0000235,skos:exactMatc
uterus,UBERON:0000995,mature NK T cell,PV:0000399,mature NK T cell,CL:0000814,skos:exactMatch
uterus,UBERON:0000995,myometrial cell,PV:0000400,myometrial cell,CL:0002366,skos:exactMatch
uterus,UBERON:0000995,pericyte,PV:0000401,pericyte,CL:0000669,skos:exactMatch
uterus,UBERON:0000995,vascular associated smooth muscle cell,PV:0000402,vascular associated smooth muscle cell,CL:0000359,skos:exactMatch
uterus,UBERON:0000995,vascular associated smooth muscle cell,PV:0000402,vascular associated smooth muscle cell,CL:0000359,skos:exactMatch