Dev v2

.github/workflows/build-wheels.yaml

@@ -12,7 +12,7 @@ jobs:
         # Exclude windows-2019
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
 
       - name: Build wheels
@@ -30,7 +30,7 @@ jobs:
     name: Build source distribution
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Build sdist
         run: pipx run build --sdist

.github/workflows/lint.yaml

@@ -9,8 +9,8 @@ jobs:
   pre-commit:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v3
-    - uses: actions/setup-python@v3
+    - uses: actions/checkout@v4
+    - uses: actions/setup-python@v4
       with:
-        python-version: 3.8
-    - uses: pre-commit/[email protected].0
+        python-version: 3.9
+    - uses: pre-commit/[email protected].1

.pre-commit-config.yaml

@@ -7,12 +7,11 @@ repos:
     args: [--unsafe]
   - id: end-of-file-fixer
   - id: trailing-whitespace
-- repo: https://github.com/codespell-project/codespell
-  rev: v2.2.1
+- repo: https://github.com/astral-sh/ruff-pre-commit
+  # Ruff version.
+  rev: v0.1.6
   hooks:
-  - id: codespell
-    args: [--write-changes, "-L ure,nd,ue,parms,Ue,statics,indexs"]
-- repo: https://github.com/psf/black
-  rev: 22.6.0
-  hooks:
-  - id: black
+    # Run the linter.
+    - id: ruff
+    # Run the formatter.
+    - id: ruff-format

CHANGELOG.md

@@ -4,6 +4,23 @@ All notable changes to BEAT will be documented in this file.
 
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/).
 
+## [2.0.0] 24 March 2024
+Major new release! Previous project setups are not back-compatible. Supports python3.9+.
+
+Contributors: Hannes Vasyura-Bathke @hvasbath
+
+### Added
+- new inference mode: "bem" for Boundary Element Modeling
+- allow for multi-source type inference: e.g. MTSource, RectangularSource
+- added parameter defaults module and config functionality
+
+### Changed
+- using pymc v5 and pytensor instead of pymc v3 and theano --> makes old setups incompatible
+- n_sources in config is now list of integers, previous: integer
+- source_type to: list of source_types, variable changed to source_types
+- adopted ruff linting
+- replace nose with pytest testing
+
 ## [1.2.5]  24 Mai 2023
 Contributors: Hannes Vasyura-Bathke @hvasbath
 

README.md

@@ -3,10 +3,38 @@
 
 # Bayesian Earthquake Analysis Tool
 
-If you came looking for the beat package calculating internet time you can find it [here](https://github.com/tonyskapunk/beat).
+Documentation of the current version moved to the pyrocko server can be found here:
+https://pyrocko.org/beat/
+
+Based on pyrocko, pytensor and pymc
+
+## Tutorials
+Step by step points on how to use the tool for several scenarios can be found here:
+[Examples](https://pyrocko.org/beat/docs/current/examples/index.html#)
+
+## Citation
+If your work results in an publication where you used BEAT we kindly ask you to consider citing the BEAT software package and the related article.:
+
+ > Vasyura-Bathke, Hannes; Dettmer, Jan; Steinberg, Andreas; Heimann, Sebastian; Isken, Marius; Zielke, Olaf; Mai, Paul Martin; Sudhaus, Henriette; Jónsson, Sigurjón: The Bayesian Earthquake Analysis Tool. Seismological Research Letters. https://doi.org/10.1785/0220190075
+
+ > Vasyura-Bathke, Hannes; Dettmer, Jan; Steinberg, Andreas; Heimann, Sebastian; Isken, Marius; Zielke, Olaf; Mai, Paul Martin; Sudhaus, Henriette; Jónsson, Sigurjón (2019): BEAT - Bayesian Earthquake Analysis Tool. V. 1.0. GFZ Data Services. http://doi.org/10.5880/fidgeo.2019.024
+
+
+## Support
+For substantial issues please use and check the "issues" tab here in the repository.
+For common issues please check out the BEAT [FAQ](https://pyrocko.org/beat/docs/current/faq.html).
+For smaller issues or short clarifications there is a support [chat](https://hive.pyrocko.org/pyrocko-support/channels/beat). This is provided by the pyrocko project and is accessible after a short account creation.
+
+Finally, there is the option to write an email to:
+
+Hannes Vasyura-Bathke
+[email protected]
+
+Andreas Steinberg
+[email protected]
 
-Based on pyrocko, theano and pymc3
 
+## Changelog
 14 February 2023
 Version 1.2.4 is released. Details in the [changelog](https://github.com/hvasbath/beat/blob/master/CHANGELOG.md).
 
@@ -34,8 +62,6 @@ New [tutorial](https://pyrocko.org/beat/docs/current/examples/FFI_static_resolut
 A new version 1.1.0 is released adding support for multi-segmented fault setups and tensile dislocations.
 Checkout the [changelog](https://github.com/hvasbath/beat/blob/master/CHANGELOG.md) for all the details.
 
-Documentation of the current version moved to the pyrocko server can be found here:
-https://pyrocko.org/beat/
 
 New [tutorial](https://pyrocko.org/beat/docs/current/examples/Rectangular_tensile.html) on tensile dislocation modeling.
 
@@ -49,8 +75,6 @@ current academic system, I had to decide for a delayed release of the documentat
 be available provided by someone. Thus, in case you are willing to contribute I would be more than happy to guide/ support
 you in writing parts of the documentation for a particular feature-if you want to try it out.
 
-The legacy documentation of beat v1.0. can be found under: https://hvasbath.github.io/beat/
-
 ## License
 GNU General Public License, Version 3, 29 June 2007
 
@@ -61,18 +85,6 @@ BEAT is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY
 You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.
 
 
-## Citation
-If your work results in an publication where you used BEAT we kindly ask you to consider citing the BEAT software package and the related article.:
-
- > Vasyura-Bathke, Hannes; Dettmer, Jan; Steinberg, Andreas; Heimann, Sebastian; Isken, Marius; Zielke, Olaf; Mai, Paul Martin; Sudhaus, Henriette; Jónsson, Sigurjón: The Bayesian Earthquake Analysis Tool. Seismological Research Letters. https://doi.org/10.1785/0220190075
-
- > Vasyura-Bathke, Hannes; Dettmer, Jan; Steinberg, Andreas; Heimann, Sebastian; Isken, Marius; Zielke, Olaf; Mai, Paul Martin; Sudhaus, Henriette; Jónsson, Sigurjón (2019): BEAT - Bayesian Earthquake Analysis Tool. V. 1.0. GFZ Data Services. http://doi.org/10.5880/fidgeo.2019.024
-
-
-## Tutorials
-Step by step points on how to use the tool for several scenarios can be found here:
-[Examples](https://hvasbath.github.io/beat/examples/index.html)
-
 ## Data import
 ### Geodetic
 We recommend to prepare the SAR data (subsampling, data covariance estimation) using KITE (www.pyrocko.org).
@@ -107,18 +119,7 @@ containing a list of 2 lists:
 We invite the users to propose data formats or outputs of specific programs that they would
 like to see implemented.
 
-## Support
-For substantial issues please use and check the "issues" tab here in the repository.
-For common issues please check out the BEAT [FAQ](https://hvasbath.github.io/beat/faq.html).
-For smaller issues or short clarifications there is a support [chat](https://hive.pyrocko.org/pyrocko-support/channels/beat). This is provided by the pyrocko project and is accessible after a short account creation.
-
-Finally, there is the option to write an email to:
-
-Hannes Vasyura-Bathke
-[email protected]
-
-Andreas Steinberg
-[email protected]
+P.S.: If you came looking for the beat package calculating internet time you can find it [here](https://github.com/tonyskapunk/beat).
 
 ## Contributions
 This is an open source project and contributions to the repository are welcome!