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Releases: icgc-argo-workflows/gatk-mutect2-variant-calling

4.1.8.0-7.0

29 Jun 18:52
@lindaxiang lindaxiang
4.1.8.0-7.0
b6f6792
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4.1.8.0-7.0 Latest
Latest

What's Changed

  • update song/score modules version
  • add defaults to song/score containers and versions
  • update payload-gen-variant-calling to remove sensitive metrics
  • update build-test-release.yml

Full Changelog: 4.1.8.0-6.0...4.1.8.0-7.0

Assets 2
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gatk-mutect2-variant-calling.v4.1.8.0-7.0

29 Jun 18:40
@github-actions github-actions
gatk-mutect2-variant-calling.v4.1.8.0-7.0
b6f6792
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gatk-mutect2-variant-calling.v4.1.8.0-7.0
  • Release gatk-mutect2-variant-calling.v4.1.8.0-7.0 (b6f6792)
  • Package gatk-mutect2-variant-calling.v4.1.8.0-7.0.tar.gz (sha256: 8bff01ee4e030b7f1011fd65d94ae8079eec89db0e0b7fb170d07ce622fc903d)
  • Package URI github.com/icgc-argo-workflows/gatk-mutect2-variant-calling/[email protected]
  • Run the package: nextflow run icgc-argo-workflows/gatk-mutect2-variant-calling/gatk-mutect2-variant-calling/main.nf -r gatk-mutect2-variant-calling.v4.1.8.0-7.0 -params-file <params-json-file>
Assets 4
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4.1.8.0-6.0

07 May 16:03
@lindaxiang lindaxiang
4.1.8.0-6.0
77583f0
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4.1.8.0-6.0

Note:

  • compatible argo-metadata-schema versions: 0.4.0, 0.5.0
  • requires Nextflow 20.10.0 or higher
Assets 2
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gatk-mutect2-variant-calling.v4.1.8.0-6.0

07 May 15:57
@github-actions github-actions
gatk-mutect2-variant-calling.v4.1.8.0-6.0
77583f0
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gatk-mutect2-variant-calling.v4.1.8.0-6.0
  • Release gatk-mutect2-variant-calling.v4.1.8.0-6.0 (77583f0)
  • Package gatk-mutect2-variant-calling.v4.1.8.0-6.0.tar.gz (sha256: 1c23177f5f04440594c33f7ffea3dacab74bb99b0cbaea8f118c9c485406c5f4)
Assets 4
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4.1.8.0-5.0

19 Apr 20:51
@junjun-zhang junjun-zhang
4.1.8.0-5.0
b559b5e
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4.1.8.0-5.0

Note:

  1. compatible argo-metadata-schema versions: 0.4.0, 0.5.0
  2. requires Nextflow 20.07.1 or higher
Assets 2
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gatk-mutect2-variant-calling.v4.1.8.0-5.0

19 Apr 20:40
@github-actions github-actions
gatk-mutect2-variant-calling.v4.1.8.0-5.0
b559b5e
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gatk-mutect2-variant-calling.v4.1.8.0-5.0
  • Release gatk-mutect2-variant-calling.v4.1.8.0-5.0 (b559b5e)
  • Package gatk-mutect2-variant-calling.v4.1.8.0-5.0.tar.gz (sha256: 74dd0fd8baedc874bf60eaad0e43daaf9ef1d147be20b5ca57a9c6f94bdcbd0a)
Assets 4
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4.1.8.0-4.0

16 Apr 19:13
@junjun-zhang junjun-zhang
4.1.8.0-4.0
cea3e6c
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4.1.8.0-4.0
  • updated to use [email protected] that supports updated data category/type/subtype and analysis tools, and pass info.origin field from input analysis to generated payload

Note:

  1. compatible argo-metadata-schema versions: 0.4.0, 0.5.0
  2. requires Nextflow 20.07.1 or higher
Assets 2
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gatk-mutect2-variant-calling.v4.1.8.0-4.0

16 Apr 18:51
@github-actions github-actions
gatk-mutect2-variant-calling.v4.1.8.0-4.0
cea3e6c
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gatk-mutect2-variant-calling.v4.1.8.0-4.0
  • Release gatk-mutect2-variant-calling.v4.1.8.0-4.0 (cea3e6c)
  • Package gatk-mutect2-variant-calling.v4.1.8.0-4.0.tar.gz (sha256: 0b6b21d8893ccd63060e85650cd813f100fa1d291d419c5717b3102e6af54c9b)
Assets 4
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4.1.8.0-3.0

08 Apr 15:34
@junjun-zhang junjun-zhang
4.1.8.0-3.0
c873f30
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4.1.8.0-3.0

Note:

  1. compatible argo-metadata-schema versions: 0.4.0, 0.5.0
  2. requires Nextflow 20.07.1 or higher
Assets 2
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gatk-mutect2-variant-calling.v4.1.8.0-3.0

08 Apr 15:24
@github-actions github-actions
gatk-mutect2-variant-calling.v4.1.8.0-3.0
c873f30
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gatk-mutect2-variant-calling.v4.1.8.0-3.0
  • Release gatk-mutect2-variant-calling.v4.1.8.0-3.0 (c873f30)
  • Package gatk-mutect2-variant-calling.v4.1.8.0-3.0.tar.gz (sha256: 7259a6168974daac1d8e0377c6637dda2aa8601d7b5aab09c3c292017c3e69c3)
Assets 4
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