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Update links: imagej.nih.gov -> imagej.net
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ctrueden committed Jan 5, 2024
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2 changes: 1 addition & 1 deletion _pages/imaging/z-functions.md
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Expand Up @@ -193,7 +193,7 @@ To create an anaglyph of two images, you can use the Two Shot Anaglyph plugin. T

### Volume-rendered anaglyphs

This is an adaptation of the methods described at [https://imagej.nih.gov/nih-image/more-docs/confocals.html](https://imagej.nih.gov/nih-image/more-docs/confocals.html).
This is an adaptation of the methods described at [https://imagej.net/nih-image/more-docs/confocals.html](https://imagej.net/nih-image/more-docs/confocals.html).

This plugin can use your stack to create a side by side stereo pair, a red-cyan anaglyph, a red-green anaglyph, or a rotation movie based on user specifications. The plugin will let you specify which of the stereo pair projections you want as well as the angle of rotation between the pairs. Typical values are 6-9°.

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2 changes: 1 addition & 1 deletion _pages/plugins/stack-fitter.md
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Expand Up @@ -18,7 +18,7 @@ icon: /media/icons/plugin_icon_ImageJColor.png
![Dialog screen shot](/media/plugins/stack-fitter/stack-fitter-screenshot.png)

- **Fit function for z profiles**
- Selects the fit function, see [the ImageJ documentation](https://imagej.nih.gov/ij/docs/guide/146-30.html#tab:CurveFitterFunctions) for details on the functions.
- Selects the fit function, see [the ImageJ documentation](https://imagej.net/ij/docs/guide/146-30.html#tab:CurveFitterFunctions) for details on the functions.
- **Use previous pixel for initial fit params**
- This should be selected if adjacent pixels (or all pixels) typically have similar z profiles. Then the initial "guess" parameters are taken from the result of the previous pixel.
- When unchecked, ImageJ tries to guess the initial parameter form the data values of each curve.
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2 changes: 1 addition & 1 deletion _pages/software/nih-image.md
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Expand Up @@ -5,7 +5,7 @@ doi: 10.1038/nmeth.2089
---

{% include img align="left" name="nih-image" src="/media/icons/nih-image.png" %}
[NIH Image](https://imagej.nih.gov/nih-image/) is the precursor to
[NIH Image](https://imagej.net/nih-image/) is the precursor to
[ImageJ](/software/imagej). NIH Image was originally written by
[Wayne Rasband](/people/rasband) in Pascal for the Macintosh.
It was first released in 1987, shared on floppy disks.
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