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Adding example runs for diagnostic models #331

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merged 1 commit into from
Jun 24, 2024

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I also fixed a bug in the example he-like crystal model that will now work if you want to use it

@hakosaj hakosaj merged commit 1bc63e8 into jussihakosalo/indica311 Jun 24, 2024
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@marcosertoli marcosertoli deleted the marcosertoli/example_files branch June 26, 2024 16:29
marcosertoli added a commit that referenced this pull request Jul 3, 2024
* feat: first forays into updating Indica

* feat: 3.11 compatibility

* feat: passed precommit

* fix: disabled mypy precommit due to system error

* readme: edited readme

* fix: ppts reader data ambiguity

* Fixed README.md for installation guidelines and consequent .lock file

* Fixed 3.11 DataArray.data in another few instances

* Deleted print statement

* Upgraded default object .pkl to new versions.

* Deleted print statement

* feat: updated poetry

* feat: version fix

* Marcosertoli/311 further dataarray harmonisation (#329)

* Now consistent with new DataArray convention + assigning Indica-native attributes also to DataArray coordinates.

* Modified all DataArray coordinate instances to new convention

* Fixed bug in PPTS reader (#330)

* fix: rebuilt poetry lock

* Adding example runs for diagnostic models (#331)

* Marcosertoli/fix equilibrium r shift (#333)

* Upgraded python version in poetry dev dependencies & ipython

* Previous implementation was returning rhos with NaNs as fill_value which was making inversion methods crash.

* Github CI workflows now asking for python 3.11

* Update utilities.py

BAsed on comment

* Update abstractreader.py

Removed extra prints

---------

Co-authored-by: Marco Sertoli <[email protected]>
Co-authored-by: marcosertoli <[email protected]>
michael-gemmell pushed a commit that referenced this pull request Jul 4, 2024
* feat: first forays into updating Indica

* feat: 3.11 compatibility

* feat: passed precommit

* fix: disabled mypy precommit due to system error

* readme: edited readme

* fix: ppts reader data ambiguity

* Fixed README.md for installation guidelines and consequent .lock file

* Fixed 3.11 DataArray.data in another few instances

* Deleted print statement

* Upgraded default object .pkl to new versions.

* Deleted print statement

* feat: updated poetry

* feat: version fix

* Marcosertoli/311 further dataarray harmonisation (#329)

* Now consistent with new DataArray convention + assigning Indica-native attributes also to DataArray coordinates.

* Modified all DataArray coordinate instances to new convention

* Fixed bug in PPTS reader (#330)

* fix: rebuilt poetry lock

* Adding example runs for diagnostic models (#331)

* Upgraded python version in poetry dev dependencies & ipython

* Previous implementation was returning rhos with NaNs as fill_value which was making inversion methods crash.

* Github CI workflows now asking for python 3.11

* More R_shift fixing: (R,z) range of PSI and RHO must be restricted to where every time and radial points are != NaN

* Fixed revision reading across all methods

* Changed R_midplane -> R, rpos -> R, zpos -> z for consistency across Indica

* Refactoring ASTRA available_quantities.py - reader also need reprocessing

* Assigning PPTS z as additional coordinate to midplane fit

* Fixed XRCS wavelength rescaling

---------

Co-authored-by: Jussi Hakosalo <[email protected]>
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2 participants