New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Pandas dataframe integration #324

Open

hkmztrk opened this issue Jul 14, 2020 · 0 comments

hkmztrk commented Jul 14, 2020 •

edited

Loading

Hello,

Is there an easy way to create a data frame from the records? Something like below?

vcf_reader = vcf.Reader(open(somatic, 'r'))
lines = [el for el in vcf_reader]
df_vcf = pd.DataFrame(lines)

Thanks!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment