smk-simple-slurm 1.3.0
New status script status-sacct-robust.sh
that re-runs sacct
multiple times
if it fails to return a valid status. This is more robust and is recommended if
you notice Snakemake unexpectedly re-submits jobs that are still pending or
running. See Issue #9 for discussion
Example with job grouping
Link to Christian's profile for AWS ParallelCluster
Example that uses pinned conda environments (pinned-conda-envs
) (requires
minimum of Snakemake version 7.8.0)
Example that inserts the current date in the log file paths (log-file-date
)
Example rule with thousands of input files (many-input-files
)