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21 Open 115 Closed
21 Open 115 Closed
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Issues list

Reroot at edge may assign edge labels incorrectly bug
#216 opened Nov 1, 2024 by terrycojones
6
PhylogeneticDistanceMatrix methods are awkward to use because the Taxon class uses is in its __eq__ method enhancement
#215 opened Oct 23, 2024 by terrycojones
1
Provide public interface for _convert_node_to_root_polytomy enhancement
#169 opened May 19, 2023 by mmore500
1
1
Chore: Fix ResourceWarnings from tests enhancement
#165 opened Apr 11, 2023 by mmore500
5 tasks
Some examples in /docs/source/examples are broken enhancement infrastructure
#160 opened Apr 1, 2023 by mmore500
14 tasks
Correctly load newick node annotations containing nested lists enhancement
#145 opened Dec 8, 2022 by willdumm
Should Node.extract_subtree return Tree, not seed node, & copy annotations? enhancement
#143 opened Sep 1, 2022 by MordorianGuy
multiprocess :: mp.cpu_count() instead of len(os.sched_getaffinity(0)) enhancement
#142 opened Aug 31, 2022 by EricDeveaud
resolve_polytomies could return number of polytomies resolved enhancement
#126 opened Oct 7, 2020 by hyanwong
Test suite vanished from download tarball enhancement infrastructure
#122 opened Oct 8, 2019 by tillea
4
dendropy.utility.error.UltrametricityError enhancement
#121 opened Sep 19, 2019 by nick-youngblut
2
accuracy of gene tree simlation question
#120 opened Sep 6, 2019 by zzbbf123
Preserve_underscores enhancement
#112 opened Apr 23, 2019 by wrightaprilm
2
MRCA algorithm can be faster enhancement
#99 opened Sep 11, 2018 by niemasd
1
Floating point error accumulation in contained coalescent trees enhancement
#63 opened Jul 13, 2016 by yasuiniko
possible enhancement: retain edge identity when rerooting enhancement
#54 opened May 17, 2016 by mtholder
1
Maximum recursion depth error enhancement
#52 opened May 13, 2016 by ericmjl
8
Feature request: Writing to JSON schema enhancement
#46 opened Mar 31, 2016 by Zsailer
14
Parsing NEXUS trees with undefined taxon labels does not raise error enhancement
#37 opened Oct 5, 2015 by jeetsukumaran
Common Ancestors age strategy for --set-edges enhancement
#32 opened Sep 11, 2015 by nitishnarula
Ordered Parsimony enhancement
#25 opened Aug 12, 2015 by mccannj9
1
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