v0.3.8 #71
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| name: pycistem CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10 | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| compile_cistem: | |
| runs-on: ubuntu-20.04 | |
| container: jojoelfe/cistem_ci_gcc | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| name: Checkout pycistem | |
| - run: git -C cisTEM pull || git clone https://github.com/timothygrant80/cisTEM.git | |
| name: Checkout cisTEM | |
| - name: Get cisTEM sha | |
| id: getsha | |
| run: | | |
| cd cisTEM | |
| echo "::set-output name=sha::$(git rev-parse HEAD)" | |
| - name: Cache cisTEM | |
| uses: actions/cache@v3 | |
| id: cache | |
| with: | |
| key: 'sha_${{ steps.getsha.outputs.sha }}' | |
| path: | | |
| cisTEM/build/gcc/src/libcore.a | |
| cisTEM/build/gcc/cistem_config.h | |
| - name: Build cisTEM | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| cd cisTEM | |
| ./regenerate_project.b | |
| mkdir -p build/gcc | |
| cd build/gcc | |
| CC=gcc CXX=g++ CPPFLAGS=-fPIC CXXFLAGS=-fPIC CFLAGS=-fPIC ../../configure --enable-staticmode --enable-samples --enable-experimental --enable-openmp --with-wx-config=wx-config | |
| cd src | |
| make -j 2 libcore.a | |
| - name: Create artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: 'cisTEM artifact' | |
| path: | | |
| cisTEM/build/gcc/src/libcore.a | |
| cisTEM/build/gcc/cistem_config.h | |
| build: | |
| needs: compile_cistem | |
| continue-on-error: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python: ['3.9','3.10','3.11'] | |
| runs-on: ubuntu-20.04 | |
| container: jojoelfe/cistem_ci_gcc | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - run: git -C cisTEM pull || git clone https://github.com/timothygrant80/cisTEM.git | |
| name: Checkout cisTEM | |
| - name: Install unzip | |
| run: apt-get update && apt-get install unzip | |
| - name: Install pyenv | |
| uses: gabrielfalcao/pyenv-action@v11 | |
| - name: Install python | |
| run: | | |
| pyenv install -s ${{ matrix.python }} | |
| pyenv local ${{ matrix.python }} && pip install -U pip | |
| - name: Copy cisTEM artifact | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: cisTEM artifact | |
| path: | | |
| cisTEM/build/gcc | |
| - name: Install Hatch | |
| run: pyenv local ${{ matrix.python }} && pip install hatch | |
| - name: Build project | |
| run: | | |
| pyenv local ${{ matrix.python }} && hatch build | |
| - name: Create artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: 'Wheel for Python ${{ matrix.python }}' | |
| path: dist/pycistem*.whl | |
| - name: Publish | |
| if: contains(github.ref, 'tags') | |
| env: | |
| HATCH_INDEX_AUTH: ${{ secrets.PYPI_TOKEN }} | |
| HATCH_INDEX_USER: __token__ | |
| run: | | |
| pyenv local ${{ matrix.python }} && hatch publish dist/*.whl | |