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ntolley committed Sep 5, 2023
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111 changes: 63 additions & 48 deletions paper.bib
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Expand Up @@ -5,7 +5,8 @@ @article{neymotin2020human
volume={9},
pages={e51214},
year={2020},
publisher={eLife Sciences Publications Limited}
publisher={eLife Sciences Publications Limited},
doi={10.7554/eLife.51214}
}

@article{jones2009quantitative,
Expand All @@ -16,7 +17,8 @@ @article{jones2009quantitative
number={6},
pages={3554--3572},
year={2009},
publisher={American Physiological Society Bethesda, MD}
publisher={American Physiological Society Bethesda, MD},
doi={10.1152/jn.00535.2009}
}

@article{kohl2022neural,
Expand All @@ -27,7 +29,8 @@ @article{kohl2022neural
number={1},
pages={19--35},
year={2022},
publisher={Springer}
publisher={Springer},
doi={10.1007/s10548-021-00838-0}
}

@article{law2022thalamocortical,
Expand All @@ -38,7 +41,8 @@ @article{law2022thalamocortical
number={4},
pages={668--688},
year={2022},
publisher={Oxford University Press}
publisher={Oxford University Press},
doi={10.1093/cercor/bhab221}
}

@article{sliva2018prospective,
Expand All @@ -48,7 +52,8 @@ @article{sliva2018prospective
volume={9},
pages={2117},
year={2018},
publisher={Frontiers Media SA}
publisher={Frontiers Media SA},
doi={10.3389/fpsyg.2018.02117}
}

@article{bonaiuto2021laminar,
Expand All @@ -58,7 +63,8 @@ @article{bonaiuto2021laminar
volume={242},
pages={118479},
year={2021},
publisher={Elsevier}
publisher={Elsevier},
doi={10.1016/j.neuroimage.2021.118479}
}

@article{harris2020array,
Expand All @@ -69,7 +75,8 @@ @article{harris2020array
number={7825},
pages={357--362},
year={2020},
publisher={Nature Publishing Group UK London}
publisher={Nature Publishing Group UK London},
doi={10.1038/s41586-020-2649-2}
}

@article{dai2020brain,
Expand All @@ -80,7 +87,8 @@ @article{dai2020brain
number={11},
pages={e1008386},
year={2020},
publisher={Public Library of Science San Francisco, CA USA}
publisher={Public Library of Science San Francisco, CA USA},
doi={10.1371/journal.pcbi.1008386}
}

@article{dura2019netpyne,
Expand All @@ -90,16 +98,21 @@ @article{dura2019netpyne
volume={8},
pages={e44494},
year={2019},
publisher={eLife Sciences Publications, Ltd}
publisher={eLife Sciences Publications, Ltd},
doi={10.7554/eLife.44494}
}

@article{fernandez2023laminar,
title={Laminar Specificity of the Auditory Perceptual Awareness Negativity: A Biophysical Modeling Study},
author={Fernandez Pujol, Carolina and Blundon, Elizabeth G and Dykstra, Andrew R},
journal={bioRxiv},
pages={2023--03},
journal={PLOS Computational Biology},
publisher = {Public Library of Science},
year={2023},
publisher={Cold Spring Harbor Laboratory}
month={06},
volume={19},
doi={10.1371/journal.pcbi.1011003},
pages={1-23},
number = {6}
}

@article{friston2003dynamic,
Expand All @@ -110,7 +123,8 @@ @article{friston2003dynamic
number={4},
pages={1273--1302},
year={2003},
publisher={Elsevier}
publisher={Elsevier},
doi={10.1016/b978-012264841-0/50054-8}
}

@article{gramfort2013meg,
Expand All @@ -119,7 +133,8 @@ @article{gramfort2013meg
journal={Frontiers in neuroscience},
pages={267},
year={2013},
publisher={Frontiers}
publisher={Frontiers},
doi={10.3389/fnins.2013.00267}
}

@article{litvak2011eeg,
Expand All @@ -128,7 +143,8 @@ @article{litvak2011eeg
journal={Computational intelligence and neuroscience},
volume={2011},
year={2011},
publisher={Hindawi}
publisher={Hindawi},
doi={10.1155/2011/852961}
}

@article{linden2014lfpy,
Expand All @@ -138,7 +154,8 @@ @article{linden2014lfpy
volume={7},
pages={41},
year={2014},
publisher={Frontiers Media SA}
publisher={Frontiers Media SA},
doi={10.3389/fninf.2013.00041}
}

@article{sanz2013virtual,
Expand All @@ -148,16 +165,19 @@ @article{sanz2013virtual
volume={7},
pages={10},
year={2013},
publisher={Frontiers Media SA}
publisher={Frontiers Media SA},
doi={10.3389/fninf.2013.00010}
}

@article{szul2022diverse,
title={Diverse beta burst waveform motifs characterize movement-related cortical dynamics},
author={Szul, Maciej J and Papadopoulos, Sotirios and Alavizadeh, Sanaz and Daligaut, S{\'e}bastien and Schwartz, Denis and Mattout, J{\'e}r{\'e}mie and Bonaiuto, James J},
journal={bioRxiv},
pages={2022--12},
year={2022},
publisher={Cold Spring Harbor Laboratory}
title = {Diverse beta burst waveform motifs characterize movement-related cortical dynamics},
journal = {Progress in Neurobiology},
volume = {228},
pages = {102490},
year = {2023},
issn = {0301-0082},
doi = {10.1016/j.pneurobio.2023.102490},
author = {Maciej J. Szul and Sotirios Papadopoulos and Sanaz Alavizadeh and Sébastien Daligaut and Denis Schwartz and Jérémie Mattout and James J. Bonaiuto}
}

@article{thorpe2021distinct,
Expand All @@ -166,7 +186,8 @@ @article{thorpe2021distinct
journal={bioRxiv},
pages={2021--10},
year={2021},
publisher={Cold Spring Harbor Laboratory}
publisher={Cold Spring Harbor Laboratory},
doi={10.1101/2021.10.11.463545}
}

@article{tolley2023methods,
Expand All @@ -175,7 +196,8 @@ @article{tolley2023methods
journal={bioRxiv},
pages={2023--04},
year={2023},
publisher={Cold Spring Harbor Laboratory}
publisher={Cold Spring Harbor Laboratory},
doi={10.1101/2023.04.17.537118}
}

@article{hamalainen1993magnetoencephalography,
Expand All @@ -186,7 +208,8 @@ @article{hamalainen1993magnetoencephalography
number={2},
pages={413},
year={1993},
publisher={APS}
publisher={APS},
doi={10.1103/RevModPhys.65.413}
}

@article{tejero-cantero2020sbi,
Expand Down Expand Up @@ -214,17 +237,6 @@ @article {Lankinen2023.06.16.545371
eprint = {https://www.biorxiv.org/content/early/2023/06/17/2023.06.16.545371.full.pdf}
}

@article{harris2020array,
title={Array programming with NumPy},
author={Harris, Charles R and Millman, K Jarrod and Van Der Walt, St{\'e}fan J and Gommers, Ralf and Virtanen, Pauli and Cournapeau, David and Wieser, Eric and Taylor, Julian and Berg, Sebastian and Smith, Nathaniel J and others},
journal={Nature},
volume={585},
number={7825},
pages={357--362},
year={2020},
publisher={Nature Publishing Group UK London}
}

@article{virtanen2020scipy,
title={SciPy 1.0: fundamental algorithms for scientific computing in Python},
author={Virtanen, Pauli and Gommers, Ralf and Oliphant, Travis E and Haberland, Matt and Reddy, Tyler and Cournapeau, David and Burovski, Evgeni and Peterson, Pearu and Weckesser, Warren and Bright, Jonathan and others},
Expand All @@ -233,7 +245,8 @@ @article{virtanen2020scipy
number={3},
pages={261--272},
year={2020},
publisher={Nature Publishing Group}
publisher={Nature Publishing Group},
doi={10.1038/s41592-019-0686-2}
}

@article{hunter2007matplotlib,
Expand All @@ -244,7 +257,8 @@ @article{hunter2007matplotlib
number={03},
pages={90--95},
year={2007},
publisher={IEEE Computer Society}
publisher={IEEE Computer Society},
doi={10.1109/MCSE.2007.55}
}

@article{hines1997neuron,
Expand All @@ -255,19 +269,20 @@ @article{hines1997neuron
number={6},
pages={1179--1209},
year={1997},
publisher={MIT Press}
publisher={MIT Press},
doi={10.1162/neco.1997.9.6.1179 }
}

@unpublished{ipywidgets2015,
author = {{Jupyter widgets community}},
title = {ipywidgets, a GitHub repository},
year = {2015},
url = {https://github.com/jupyter-widgets/ipywidgets}
author = {{Jupyter widgets community}},
title = {ipywidgets, a GitHub repository},
year = {2015},
url = {https://github.com/jupyter-widgets/ipywidgets}
}

@unpublished{voila2019,
author = {{Voilà community}},
title = {voila, a GitHub repository},
year = {2019},
url = {https://github.com/voila-dashboards/voila}
author = {{Voilà community}},
title = {voila, a GitHub repository},
year = {2019},
url = {https://github.com/voila-dashboards/voila}
}

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