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A tiny graph database

Goal: A simple and relatively efficient graph data store that can handle billions of vertexes on single machine. In particular, we wanted a local copy of Freebase.

This project is called "Tinygraph" because the codebase is tiny. It just doesn't do much, but it's pretty efficient and easy to use.

Status: Experimental. Definitely not over-engineered.

What it can do:

  1. Store triples (actually "quads") indexed for (prefixes of) subject-property-object, object-property-subject, and property-subject-object access.
  2. Find edges based on those indexes.
  3. Give you a barely functional Go API.
  4. Give you a barely functional Javascript-from-HTTP API based on that Go API.

That's about it. The core code is fewer than 1,000 lines of Go.

What it can't do:

  1. Query planning. You just traverse paths. (But it'll be easy to expose RocksDB's GetApproximateSizes.)
  2. Fancy graph algorithms.
  3. Provide much safety.

For comparison, see:

  1. Cayley
  2. Accumulo
  3. Neo4j

and many other graph databases.

How it works:

  1. Uses RocksDB. Could use any key-value store that provides prefix ordering.
  2. Does not intern strings. Instead, uses RocksDB's Snappy compression in an simple attempt to mitigate the cost of duplicates (while avoiding read+update during each write).
  3. Uses the nifty robertkrimen/otto Javascript implementation in Go.

Getting started:

Get Go.

Then try to get RocksDB built:

gcc -v # 4.7+
sudo apt-get install -y libgflags-dev libsnappy-dev zlib1g-dev libbz2-dev
git clone https://github.com/facebook/rocksdb.git
cd rocksdb
make shared_lib
# Suit yourself re installation.
sudo cp librocksdb.so /usr/lib
(cd /usr/include && sudo ln -s ~/rocksdb/include/rocksdb rocksdb)

Then

go get && go build

Quick example:

It's easy to load WordNet RDF. Here's an example of loading a useful subset of WordNet quickly.

wget http://wordnet-rdf.princeton.edu/wn31.nt.gz
zcat wn31.nt.gz | grep 'hyponym\|hypernym\|meronym\|holonym\|#label' | gzip > somewn.nt.gz
rm -rf wordnet.db
./tinygraph -config config.wordnet -lang eng -load somewn.nt.gz -serve

Then:

cat <<EOF > holo.js
function holonyms(term) {
  var label = G.Bs("http://www.w3.org/2000/01/rdf-schema#label");
  var holo = G.Bs("http://wordnet-rdf.princeton.edu/ontology#part_holonym");
  var paths = G.In(label).Out(holo).Out(label).Walk(G.Graph(), G.Vertex(term)).Collect();
  var uniq = {};
  var acc = [];
  for (var i=0; i<paths.length; i++) {
	  var h = paths[i][2].Strings()[2];
	  if (!uniq[h]) {
          uniq[h] = true;
		  acc.push(h);
	  }
  }
  return acc;
}
EOF
curl --data-urlencode '[email protected]' http://localhost:8080/js
# Use that stored procedure.
curl --data-urlencode 'js=holonyms("Africa")' http://localhost:8080/js

You'll hopefully see

[
    "Barbary",
    "Nubia",
    "Mahgrib",
    "African nation",
    "East Africa",
    "South West Africa",
    "Republic of Angola",
    "Republic of Burundi",
    "Republic of Cameroon",
    "Central African Republic",
    "Tchad",
    "Republic of the Congo",
    "Zaire",
	...
]

Check out examples/ for more. Also see freebase.sh.

ToDo:

  1. More logging.
  2. More test cases.
  3. More docs (especially configuration).
  4. Buffered Stepper channels.
  5. Expose RocksDB GetApproximateSizes.
  6. Deal with concurrent requests and Javascript.
  7. Concurrency using mutexes and such.

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Tinygraph is a little graph-like database

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  • Shell 1.5%
  • JavaScript 0.1%