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made two env files for gpu & cpu
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mese79 committed Oct 9, 2024
1 parent c56c0ad commit 99df772
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Showing 2 changed files with 34 additions and 2 deletions.
3 changes: 1 addition & 2 deletions env.yml → env_cpu.yml
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@@ -1,7 +1,6 @@
name: featureforest
channels:
- pytorch
- anaconda
- conda-forge
- defaults
dependencies:
Expand All @@ -18,7 +17,7 @@ dependencies:
- napari-svg
- h5py
- pytorch=2.1.2
- torchvision
- torchvision=0.16.2
- pooch
- pip
- pip:
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33 changes: 33 additions & 0 deletions env_gpu.yml
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@@ -0,0 +1,33 @@
name: featureforest
channels:
- pytorch
- nvidia
- conda-forge
- defaults
dependencies:
- python=3.9
- pyqt=5.15.10
- qtpy
- magicgui
- scikit-learn
- scikit-image
- scipy
- napari
- napari-console
- napari-plugin-engine
- napari-svg
- h5py
- pytorch-cuda=11.8
- pytorch=2.1.2
- torchvision=0.16.2
- pooch
- pip
- pip:
- numpy==1.23.5 # timm drops deprecation warnings with newer versions
- matplotlib
- opencv-python
- timm
- pynrrd
- git+https://github.com/facebookresearch/segment-anything.git
- segment-anything-hq
- git+https://github.com/juglab/featureforest.git

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