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Update utilities.R stat_pvalue_manual Positions on the plot #113

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Update utilities.R stat_pvalue_manual Positions on the plot #113

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7 changes: 6 additions & 1 deletion R/utilities.R
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Original file line number Diff line number Diff line change
Expand Up @@ -271,7 +271,12 @@ get_levels <- function(data, group){
return(data)
group.values <- data %>% pull(group.col)
if(!is.factor(group.values))
group.values <- as.factor(group.values)
# group.values <- as.factor(group.values) # conflict with ggpubr .check_data
if(is.character(group.values))
# If not factor, group (x) elements on the plot appear in the same order as in the data (ggpubr::.check_data)
#here we maintain the same order
group.values <- factor(group.values, levels = unique(group.values))
group.values <- as.factor(group.values)
if(!is.null(ref.group)){
if(ref.group != "")
group.values <- stats::relevel(group.values, ref.group)
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