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Analysis of transcriptome imputation using paired genotype-expression data from SAGE and GEUVADIS

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sage-geuvadis-predixcan

Analysis of transcriptome imputation using paired genotype-expression data from SAGE and GEUVADIS and predictions from PrediXcan.

Analyses

There are three analyses in this repository:

  1. Analysis of Predixcan predictions in SAGE (link)
  2. Crosspopulation prediction analysis in GEUVADIS data (link)
  3. Crosspopulation prediction analysis using HapMap3 data (link)

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Analysis of transcriptome imputation using paired genotype-expression data from SAGE and GEUVADIS

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  • R 58.8%
  • Shell 41.2%