Skip to content

BESST-v2
Compare
Choose a tag to compare
@ksahlin ksahlin released this 12 Nov 23:08
· 74 commits to master since this release
2.1
d982326
  • Ability to detect and scaffold with PE-contamination
  • More efficient (in practice) way to find paths with "good score" in contig graph.
  • Speed-ups in pathfinding algorithm
  • Better inference of gap sized when library is skewed (log-normal fitting - extending GapEst's assumptions of normal distribution)
  • Better inference of library insert size distribution on fragmented assemblies (based on theory from http://www.biorxiv.org/content/early/2015/08/04/023929.abstract)
Assets 2
Loading