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Use optimized parameters according to optimization in issue #423 #453

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marcelm wants to merge 1 commit into main from mcs-parameters

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marcelm commented Oct 7, 2024

The last PR to be split out from #426.

If we activate multi-context seeds only for certain read lengths, should we also only use optimized parameters for those read lengths?

To Do:

Rebase once Add syncmers at ends of reads #452 has been merged.


          Use optimized parameters according to optimization in issue #423

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marcelm mentioned this pull request

Multi-context seeds plus fixes and optimized parameters #426

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ksahlin commented Oct 7, 2024

If we activate multi-context seeds only for certain read lengths, should we also only use optimized parameters for those read lengths?

Good point

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