Merge pull request #109 from emmanuel-contreras/fix_Unknown_dtype

Fixed str dtype for Unknown cells, Closes #107
labsyspharm · Jul 15, 2024 · 296885b · 296885b
2 parents 3e68c79 + a67499a
commit 296885b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scimap/tools/phenotype_cells.py b/scimap/tools/phenotype_cells.py
@@ -309,7 +309,7 @@ def remove_phenotype(p, ID, pheno_threshold_percent, pheno_threshold_abs):
                 fail = list(x.loc[x['val'] < x['val'].sum() * pheno_threshold_percent/100].index)
             if pheno_threshold_abs is not None:
                 fail = list(x.loc[x['val'] < pheno_threshold_abs].index)
-            d[label] = d[label].replace(dict(zip(fail, np.repeat('Unknown',len(fail)))))
+            d[label] = d[label].replace(dict(zip(fail, ['Unknown'] * len(fail) )))
             # Return
             return d