The main method deboinr of this package orders a data-set consisting of probability density functions on the same grid. Printing a deboinr object visualizes a boxplot of these functions based on the notion of
distance determined by the user. It also reports outliers based on the distance chosen and k value, which is the factor by which the IQR is added beyond the center 50 percent of curves.
This repository is organized as a stand-alone R package. For questions, issues, or clarifications please reach out to Murph: [email protected].
You can install the latest version from CRAN using:
install.packages("DeBoinR")require(DeBoinR)PDF data comes from breakthrough curves simulated from the Discrete Fracture Networks computational suite dfnWorks.
xx = deboinr(DeBoinR::x_grid, as.matrix(DeBoinR::pdf_data), distance = "hellinger")print(xx)
Order of Densities:
[1] 280 245 163 148 202 209 106 231 360 164 313 193 187 204 397 362 314 64 281 268 133 206 256 232 76 323 34 91 53 285 398 263 242 258 115 373
[37] 221 55 186 165 235 142 233 340 63 379 139 13 43 67 14 261 348 351 147 205 223 181 372 241 224 308 144 273 270 330 167 357 108 255 127 234
[73] 60 269 197 395 85 146 325 56 177 276 390 317 339 199 121 266 159 371 230 396 288 322 22 48 392 24 297 295 155 105 382 217 29 367 111 82
[109] 138 222 305 363 120 388 350 103 136 211 190 243 220 102 387 244 368 302 238 210 143 212 369 178 118 149 237 309 11 89 16 160 260 44 6 355
[145] 42 12 74 326 282 84 389 274 201 7 128 200 119 96 365 109 306 10 374 219 364 101 319 32 262 71 259 93 318 249 98 130 216 315 284 132
[181] 134 294 99 151 337 62 158 28 41 150 169 65 50 277 61 92 324 227 39 182 246 79 125 208 292 198 267 310 265 345 338 278 72 184 36 77
[217] 196 291 87 331 35 95 298 344 8 116 129 370 4 290 380 90 18 20 321 131 26 15 347 75 251 296 334 110 215 161 229 168 287 279 272 83
[253] 328 248 66 264 342 114 393 33 113 191 240 300 247 47 358 185 88 70 23 311 112 179 354 52 359 174 377 375 252 346 213 5 253 304 293 2
[289] 40 381 175 203 156 31 58 25 189 123 329 17 152 135 385 107 275 341 195 188 194 361 38 312 69 46 104 30 154 218 126 332 366 1 226 172
[325] 19 386 81 286 250 301 57 383 122 327 27 378 97 176 207 394 289 51 333 299 349 78 100 86 59 399 21 162 173 157 225 80 141 320 376 171
[361] 316 257 303 228 45 356 68 54 73 153 170 192 117 124 3 335 391 336 94 37 254 384 137 49 343 283 140 214 353 9 180 236 145 307 183 271
[397] 352 239 166
Indices of Outliers:
[1] 3 9 37 49 54 73 94 117 124 137 140 145 153 166 170 180 183 192 214 236 239 254 271 283 307 335 336 343 352 353 384 391
parallel, KernSmooth, ggplot2, gridExtra, fda, pracma, stats, dplyr, graphics
Alexander C. Murph, Justin D. Strait, Kelly R. Moran, Jeffrey D. Hyman, & Philip H. Stauffer. (2023). Visualization and Outlier Detection for Probability Density Function Ensembles. In Review.
This software has been approved for open source release and has been assigned O4688
© 2023. Triad National Security, LLC. All rights reserved. This program was produced under U.S. Government contract 89233218CNA000001 for Los Alamos National Laboratory (LANL), which is operated by Triad National Security, LLC for the U.S. Department of Energy/National Nuclear Security Administration. All rights in the program are reserved by Triad National Security, LLC, and the U.S. Department of Energy/National Nuclear Security Administration. The Government is granted for itself and others acting on its behalf a nonexclusive, paid-up, irrevocable worldwide license in this material to reproduce, prepare derivative works, distribute copies to the public, perform publicly and display publicly, and to permit others to do so.
DeBoinR is distributed under a MIT License:
Copyright 2023 Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.