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[HOPSWORKS-1770] reindex featurestore index (#58)
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,38 @@ | ||
| /* | ||
| * This file is part of ePipe | ||
| * Copyright (C) 2020, Logical Clocks AB. All rights reserved | ||
| * | ||
| * This program is free software; you can redistribute it and/or | ||
| * modify it under the terms of the GNU General Public License | ||
| * as published by the Free Software Foundation; either version 2 | ||
| * of the License, or (at your option) any later version. | ||
| * | ||
| * This program is distributed in the hope that it will be useful, | ||
| * but WITHOUT ANY WARRANTY; without even the implied warranty of | ||
| * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | ||
| * GNU General Public License for more details. | ||
| * | ||
| * You should have received a copy of the GNU General Public License | ||
| * along with this program; if not, write to the Free Software | ||
| * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. | ||
| */ | ||
| #ifndef EPIPE_FEATURESTOREREINDEXER_H | ||
| #define EPIPE_FEATURESTOREREINDEXER_H | ||
| #include "ClusterConnectionBase.h" | ||
| #include "ProjectsElasticSearch.h" | ||
|
|
||
| class FeaturestoreReindexer : public ClusterConnectionBase { | ||
| public: | ||
| FeaturestoreReindexer(const char* connection_string, const char* database_name, | ||
| const char* meta_database_name, const char* hive_meta_database_name, | ||
| const HttpClientConfig elastic_client_config, const std::string featurestore_index, | ||
| int elastic_batch_size, int elastic_issue_time, int lru_cap); | ||
| virtual ~FeaturestoreReindexer(); | ||
|
|
||
| void run(); | ||
| private: | ||
| ProjectsElasticSearch* mElasticSearch; | ||
| std::string mFeaturestoreIndex; | ||
| int mLRUCap; | ||
| }; | ||
| #endif //EPIPE_FEATURESTOREREINDEXER_H |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,104 @@ | ||
| /* | ||
| * This file is part of ePipe | ||
| * Copyright (C) 2020, Logical Clocks AB. All rights reserved | ||
| * | ||
| * This program is free software; you can redistribute it and/or | ||
| * modify it under the terms of the GNU General Public License | ||
| * as published by the Free Software Foundation; either version 2 | ||
| * of the License, or (at your option) any later version. | ||
| * | ||
| * This program is distributed in the hope that it will be useful, | ||
| * but WITHOUT ANY WARRANTY; without even the implied warranty of | ||
| * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | ||
| * GNU General Public License for more details. | ||
| * | ||
| * You should have received a copy of the GNU General Public License | ||
| * along with this program; if not, write to the Free Software | ||
| * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. | ||
| */ | ||
| #include "FeaturestoreReindexer.h" | ||
| #include "FileProvenanceConstants.h" | ||
| #include "FsMutationsDataReader.h" | ||
| #include "tables/ProjectTable.h" | ||
| #include "tables/INodeTable.h" | ||
| #include "tables/DatasetTable.h" | ||
| #include "tables/XAttrTable.h" | ||
| #include "tables/FsMutationsLogTable.h" | ||
|
|
||
| FeaturestoreReindexer::FeaturestoreReindexer(const char* connection_string, const char* database_name, | ||
| const char* meta_database_name, const char* hive_meta_database_name, | ||
| const HttpClientConfig elastic_client_config, const std::string featurestore_index, | ||
| int elastic_batch_size, int elastic_issue_time, int lru_cap) | ||
| : ClusterConnectionBase(connection_string, database_name, meta_database_name, hive_meta_database_name), | ||
| mFeaturestoreIndex(featurestore_index), mLRUCap(lru_cap) { | ||
| mElasticSearch = new ProjectsElasticSearch(elastic_client_config, elastic_issue_time, elastic_batch_size, false, MConn()); | ||
| } | ||
| void FeaturestoreReindexer::run() { | ||
| ptime start = Utils::getCurrentTime(); | ||
| mElasticSearch->start(); | ||
|
|
||
| Ndb *metaConn = create_ndb_connection(mMetaDatabaseName); | ||
| Ndb *conn = create_ndb_connection(mDatabaseName); | ||
|
|
||
| ProjectTable projectsTable(mLRUCap); | ||
| INodeTable inodesTable(mLRUCap); | ||
| DatasetTable datasetsTable(mLRUCap); | ||
| XAttrTable xAttrTable; | ||
|
|
||
| boost::unordered_map<int, std::string> projectNames; | ||
| int numXAttrs = 0; | ||
| int nonExistentXAttrs = 0; | ||
| int featurestoreDocs = 0; | ||
|
|
||
| datasetsTable.getAll(metaConn); | ||
| while (datasetsTable.next()) { | ||
| DatasetRow dataset = datasetsTable.currRow(); | ||
| if (projectNames.find(dataset.mProjectId) == projectNames.end()) { | ||
| ProjectRow pRow = projectsTable.get(metaConn, dataset.mProjectId); | ||
| projectNames[dataset.mProjectId] = pRow.mInodeName; | ||
| } | ||
| std::string projectName = projectNames[dataset.mProjectId]; | ||
|
|
||
| std::string docType = FileProvenanceConstants::isPartOfFeaturestore(dataset.mInodeId, dataset.mInodeId, projectName, dataset.mInodeName); | ||
| if (docType != DONT_EXIST_STR()) { | ||
| LOG_INFO("dataset:" << dataset.mInodeName << " has " << docType << "s"); | ||
| //this is a featurestore doc - featuregroup or trainingdataset | ||
| INodeVec inodes = inodesTable.getByParentId(conn, dataset.mInodeId); | ||
| for (INodeVec::iterator it = inodes.begin(); it != inodes.end(); ++it) { | ||
| INodeRow inode = *it; | ||
| boost::optional<std::pair<std::string, int>> nameParts = FileProvenanceConstants::splitNameVersion(inode.mName); | ||
| if (nameParts) { | ||
| eBulk bulk; | ||
| LOG_INFO("featurestore type:" << docType << " name:" << nameParts.get().first << " version:" << std::to_string(nameParts.get().second)); | ||
| std::string featurestoreDoc = FSMutationsJSONBuilder::featurestoreDoc(mFeaturestoreIndex, docType, inode.mId, | ||
| nameParts.get().first, nameParts.get().second, dataset.mProjectId, projectName, dataset.mInodeId); | ||
| bulk.push(Utils::getCurrentTime(), featurestoreDoc); | ||
| featurestoreDocs++; | ||
|
|
||
| if (inode.has_xattrs()) { | ||
| XAttrVec xattrs = xAttrTable.getByInodeId(conn, inode.mId); | ||
| for (XAttrVec::iterator xit = xattrs.begin(); xit != xattrs.end(); ++xit) { | ||
| XAttrRow xAttrRow = *xit; | ||
| LOG_INFO("xattr:" << xAttrRow.mName); | ||
| if (xAttrRow.mInodeId == inode.mId) { | ||
| bulk.push(Utils::getCurrentTime(), xAttrRow.to_upsert_json(mFeaturestoreIndex, FsOpType::XAttrUpdate)); | ||
| } else { | ||
| LOG_WARN("XAttrs doesn't exists for [" << inode.mId << "] - " << xAttrRow.to_string()); | ||
| nonExistentXAttrs++; | ||
| } | ||
| numXAttrs++; | ||
| } | ||
| } | ||
| mElasticSearch->addData(bulk); | ||
| } | ||
| } | ||
| } | ||
| } | ||
| mElasticSearch->shutdown(); | ||
| mElasticSearch->waitToFinish(); | ||
| LOG_INFO((numXAttrs - nonExistentXAttrs) << " XAttrs added, " << nonExistentXAttrs << " doesn't exists"); | ||
| LOG_INFO((featurestoreDocs) << " documents were added to featurestore index "); | ||
| LOG_INFO("Reindexing done in " << Utils::getTimeDiffInMilliseconds(start, Utils::getCurrentTime()) << " msec"); | ||
| } | ||
| FeaturestoreReindexer::~FeaturestoreReindexer() { | ||
| } |
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