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Helper scripts for working with sequencing data (16S, MetaG, or MetaT)

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Seq Helper Scripts

Helper scripts for working with sequencing data (16S, MetaG, or MetaT). Focused on tools for working with data from our sequencing core and their quirks.

Contents

  • scripts/reformat_demux
    • python script to reformat the Anschutz Sequencing core's demux files for use with YMP or one of John's snakemake pipelines
  • scripts/concat_split_seq_data
    • python script for concatenating split sequencing files from the Anschutz Sequencing core
  • Any fun little tools you've written to make life easier?

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Helper scripts for working with sequencing data (16S, MetaG, or MetaT)

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