[pre-commit.ci] pre-commit autoupdate

.pre-commit-config.yaml

@@ -1,7 +1,7 @@
 ---
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.5.0
+    rev: v5.0.0
     hooks:
       - id: trailing-whitespace
       - id: end-of-file-fixer
@@ -12,12 +12,12 @@ repos:
       - id: check-ast
       - id: check-added-large-files
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.3.5
+    rev: v0.8.4
     hooks:
       - id: ruff
         args: [--fix]
   - repo: https://github.com/psf/black
-    rev: 24.3.0
+    rev: 24.10.0
     hooks:
       - id: black
         language_version: python3
@@ -27,18 +27,18 @@ repos:
       - id: blackdoc
         additional_dependencies: ["black[jupyter]"]
   - repo: https://github.com/pre-commit/mirrors-prettier
-    rev: "v3.1.0"
+    rev: "v4.0.0-alpha.8"
     hooks:
       - id: prettier
         types_or: [yaml, html, css, scss, javascript, json] # markdown to avoid conflicts with mdformat
   - repo: https://github.com/codespell-project/codespell
-    rev: v2.2.6
+    rev: v2.3.0
     hooks:
       - id: codespell
         types_or: [python, markdown, rst]
         additional_dependencies: [tomli]
   - repo: https://github.com/asottile/pyupgrade
-    rev: v3.15.2
+    rev: v3.19.1
     hooks:
       - id: pyupgrade
   - repo: https://github.com/MarcoGorelli/madforhooks
@@ -47,18 +47,18 @@ repos:
       # - id: conda-env-sorter # conflicts with prettier
       - id: check-execution-order
   - repo: https://github.com/executablebooks/mdformat
-    rev: 0.7.17
+    rev: 0.7.21
     hooks:
       - id: mdformat
         additional_dependencies: [mdformat-gfm, mdformat-black]
         exclude: ^.github/ # this avoid the hook to wrongly reformats md issue template files
   - repo: https://github.com/kynan/nbstripout
-    rev: 0.7.1
+    rev: 0.8.1
     hooks:
       - id: nbstripout
         args: [--keep-output]
   - repo: https://github.com/nbQA-dev/nbQA
-    rev: 1.8.5
+    rev: 1.9.1
     hooks:
       - id: nbqa-black
       - id: nbqa-ruff

AUTHORS.md

@@ -13,8 +13,8 @@ The following people have made contributions to this project:
 - [Alexis Berne](https://people.epfl.ch/alexis.berne?lang=en) - EPFL
 - [Gionata Ghiggi (ghiggi)](https://github.com/ghiggi) - EPFL
 - [Jacopo Grazioli (jacgraz)](https://github.com/jacgraz) - EPFL
-- [Saverio Guzzo  (saveriogzz)](https://github.com/saveriogzz) - TU DELFT
+- [Saverio Guzzo (saveriogzz)](https://github.com/saveriogzz) - TU DELFT
 - [Kim Candolfi (KimCandolfi)](https://github.com/KimCandolfi) - EPFL
 - [Régis Longchamp (regislon)](https://github.com/regislon) - EPFL
 - [Son Pham-Ba (sphamba)](https://github.com/sphamba) - EPFL
-- [Charlotte Gisèle Weil  (charlottegiseleweil)](https://github.com/charlottegiseleweil) - EPFL
+- [Charlotte Gisèle Weil (charlottegiseleweil)](https://github.com/charlottegiseleweil) - EPFL

CODE_OF_CONDUCT.md

@@ -58,7 +58,7 @@ representative at an online or offline event.
 
 Instances of abusive, harassing, or otherwise unacceptable behavior may be
 reported to the community leaders responsible for enforcement at
-\[INSERT CONTACT METHOD\].
+[INSERT CONTACT METHOD].
 All complaints will be reviewed and investigated promptly and fairly.
 
 All community leaders are obligated to respect the privacy and security of the

README.md

@@ -124,7 +124,7 @@ we highly recommend to join the [**DISDRODB Slack Workspace**](https://join.slac
 Feel free to also open a [GitHub Issue](https://github.com/ltelab/disdrodb/issues) or a
 [GitHub Discussion](https://github.com/ltelab/disdrodb/discussions) specific to your questions or ideas.
 
-## ✍️  Contributors
+## ✍️ Contributors
 
 - [Gionata Ghiggi](https://people.epfl.ch/gionata.ghiggi)
 - [Kim Candolfi](https://github.com/KimCandolfi)
@@ -137,7 +137,7 @@ Feel free to also open a [GitHub Issue](https://github.com/ltelab/disdrodb/issue
 
 You can cite the DISDRODB software by:
 
-> Gionata Ghiggi, Kim Candolfi, Régis Longchamp, Charlotte Weil, Alexis Berne (2023). ltelab/disdrodb  Zenodo. https://doi.org/10.5281/zenodo.7680581
+> Gionata Ghiggi, Kim Candolfi, Régis Longchamp, Charlotte Weil, Alexis Berne (2023). ltelab/disdrodb Zenodo. https://doi.org/10.5281/zenodo.7680581
 
 If you want to cite a specific version, have a look at the [Zenodo site](https://doi.org/10.5281/zenodo.7680581)
 

SECURITY.md

@@ -10,7 +10,7 @@ backported more regularly.
 | Version        | Supported          |
 | -------------- | ------------------ |
 | 0.x.x (latest) | :white_check_mark: |
-| \< 0.0.17      | :x:                |
+| < 0.0.17       | :x:                |
 
 ## Unsafe YAML Loading
 

disdrodb/__init__.py

@@ -19,19 +19,19 @@
 )
 
 __all__ = [
-    "define_configs",
-    "available_stations",
     "available_campaigns",
     "available_data_sources",
     "available_sensor_names",
+    "available_stations",
     "check_archive_metadata_compliance",
     "check_archive_metadata_geolocation",
+    "define_configs",
+    "download_archive",
+    "download_station",
     "open_documentation",
-    "open_sensor_documentation",
     "open_documentation",
+    "open_sensor_documentation",
     "read_station_metadata",
-    "download_archive",
-    "download_station",
 ]
 
 __root_path__ = os.path.dirname(os.path.dirname(os.path.realpath(__file__)))

disdrodb/metadata/__init__.py

@@ -2,4 +2,4 @@
 from disdrodb.metadata.reader import read_station_metadata
 from disdrodb.metadata.search import get_list_metadata
 
-__all__ = ["read_station_metadata", "get_list_metadata", "get_archive_metadata_key_value"]
+__all__ = ["get_archive_metadata_key_value", "get_list_metadata", "read_station_metadata"]

disdrodb/tests/conftest.py

@@ -151,8 +151,8 @@ def create_fake_raw_data_file(
     return str(filepath)
 
 
-@pytest.fixture()
-def create_test_config_files(request):  # noqa PT004
+@pytest.fixture
+def create_test_config_files(request):
     """Create the specified config files into a temporary "test" directory.
 
     This fixture facilitates the creation of configuration files from provided dictionaries.

disdrodb/tests/test_api/test_api_info.py

@@ -68,15 +68,15 @@
 # valid_filepath = VALID_FNAME
 
 
-@pytest.fixture()
+@pytest.fixture
 def valid_filepath(tmp_path):
     # Create a valid filepath for testing
     filepath = tmp_path / VALID_FNAME
     filepath.write_text("content does not matter")
     return str(filepath)
 
 
-@pytest.fixture()
+@pytest.fixture
 def invalid_filepath(tmp_path):
     # Create an invalid filepath for testing
     filepath = tmp_path / INVALID_FNAME

disdrodb/tests/test_l0/test_l0b_processing.py

@@ -474,7 +474,7 @@ def test__convert_object_variables_to_string():
     assert ds["b"].dtype == "float"
 
 
-@pytest.fixture()
+@pytest.fixture
 def encoding_dict_1():
     # create a test encoding dictionary
     return {
@@ -484,7 +484,7 @@ def encoding_dict_1():
     }
 
 
-@pytest.fixture()
+@pytest.fixture
 def encoding_dict_2():
     # create a test encoding dictionary
     return {
@@ -494,7 +494,7 @@ def encoding_dict_2():
     }
 
 
-@pytest.fixture()
+@pytest.fixture
 def ds():
     # create a test xr.Dataset
     data = {

disdrodb/tests/test_metadata/test_metadata_checks.py

@@ -321,7 +321,7 @@ def test_check_archive_metadata_geolocation(tmp_path, latlon_value, platform_typ
         metadata_dict=metadata_dict,
     )
     is_valid = check_archive_metadata_geolocation(base_dir)
-    if platform_type == "mobile" and latlon_value == -9999 or platform_type != "mobile" and latlon_value == 0:
+    if (platform_type == "mobile" and latlon_value == -9999) or (platform_type != "mobile" and latlon_value == 0):
         assert is_valid
     else:
         assert not is_valid

disdrodb/tests/test_utils/test_utils_logger.py

@@ -116,7 +116,7 @@ def test_define_summary_log_when_no_problems(tmp_path):
     assert not os.path.exists(problem_log_path)
 
 
-@pytest.fixture()
+@pytest.fixture
 def test_logger():
     logger = logging.getLogger("test_logger")
     logger.setLevel(logging.DEBUG)  # Capture all log levels
@@ -155,7 +155,7 @@ def test_log_error(caplog, test_logger, capfd):
     assert " - Error message" in out
 
 
-@pytest.fixture()
+@pytest.fixture
 def log_environment(tmp_path):
     processed_dir = tmp_path / "processed"
     os.makedirs(processed_dir, exist_ok=True)

docs/source/tutorials/.gitkeep

@@ -1,2 +0,0 @@
-
-

tutorials/reader_preparation.ipynb

@@ -819,7 +819,7 @@
     "df_raw = read_raw_file(filepath, column_names=None, reader_kwargs=reader_kwargs)\n",
     "# Print the dataframe\n",
     "print(f\"Dataframe for the file {os.path.basename(filepath)} :\")\n",
-    "display(df_raw)  # noqa F821"
+    "display(df_raw)"
    ]
   },
   {
@@ -2432,7 +2432,7 @@
     "    verbose=verbose,\n",
     "    df_sanitizer_fun=df_sanitizer_fun,\n",
     ")\n",
-    "display(df)  # noqa F821"
+    "display(df)"
    ]
   },
   {