udpate notebooks

m3g · Sep 25, 2024 · 812972e · 812972e
1 parent 641a249
commit 812972e
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Showing 17 changed files with 6,563 additions and 319 deletions.
diff --git a/docs/make.jl b/docs/make.jl
@@ -11,8 +11,12 @@ import CRC32
 
 # build html pages of the pluto notebooks, only if the jl was updated
 nbs = [
-    "$(@__DIR__)/src/pluto_notebooks/proteinA_urea.jl",
     "$(@__DIR__)/src/pluto_notebooks/rnaset1_urea.jl",
+    "$(@__DIR__)/src/pluto_notebooks/rnaset1_tmao.jl",
+    "$(@__DIR__)/src/pluto_notebooks/proteinA_urea.jl",
+    "$(@__DIR__)/src/pluto_notebooks/proteinA_tmao.jl",
+    "$(@__DIR__)/src/pluto_notebooks/sh3_urea.jl",
+    "$(@__DIR__)/src/pluto_notebooks/sh3_tmao.jl",
 ]
 for nb in nbs
     checksum_file = tempdir()*"/"*string(open(CRC32.crc32,nb))
@@ -29,14 +33,22 @@ makedocs(
     format=Documenter.HTML(;
         mathengine=Documenter.MathJax3(),
         size_threshold_ignore=[
-            "$(@__DIR__)/proteinA_urea.md",
             "$(@__DIR__)/rnaset1_urea.md",
+            "$(@__DIR__)/rnaset1_tmao.md",
+            "$(@__DIR__)/proteinA_urea.md",
+            "$(@__DIR__)/proteinA_tmao.md",
+            "$(@__DIR__)/sh3_urea.md",
+            "$(@__DIR__)/sh3_tmao.md",
         ],
     ),
     pages = [
         "Home" => "index.md",
         "BdpA in urea" => "proteinA_urea.md",
+        "BdpA in tmao" => "proteinA_tmao.md",
+        "SH3 in urea" => "sh3_urea.md",
+        "SH3 in tmao" => "sh3_tmao.md",
         "RNase T1 in urea" => "rnaset1_urea.md",
+        "RNase T1 in tmao" => "rnaset1_tmao.md",
     ],
 )
 deploydocs(

diff --git a/docs/src/pluto_notebooks/proteinA_tmao.html b/docs/src/pluto_notebooks/proteinA_tmao.html