Update SSSOM Extended Prefix Map (#536)

This pull request updates sssom extended prefix map (epm). Make sure you run make tests manually. Co-authored-by: matentzn <[email protected]>
mapping-commons · May 22, 2024 · 614c342 · 614c342
1 parent 91d08b8
commit 614c342
Showing 1 changed file with 24 additions and 3 deletions.
diff --git a/src/sssom/obo.epm.json b/src/sssom/obo.epm.json
@@ -11971,10 +11971,8 @@
         "uri_prefix": "https://ecocyc.org/gene?id=",
         "uri_prefix_synonyms": [
             "http://bioregistry.io/ecocyc:",
-            "http://ecocyc.org/ECOLI/NEW-IMAGE?type=PATHWAY&object=",
             "http://ecocyc.org/gene?id=",
-            "https://bioregistry.io/ecocyc:",
-            "https://ecocyc.org/ECOLI/NEW-IMAGE?type=PATHWAY&object="
+            "https://bioregistry.io/ecocyc:"
         ]
     },
     {
@@ -18129,6 +18127,20 @@
             "https://identifiers.org/modeldb.concept:"
         ]
     },
+    {
+        "pattern": "^[a-zA-Z0-9]+\\.[a-f0-9]{24}$",
+        "prefix": "moid",
+        "uri_prefix": "https://gnss-metadata.eu/MOID/",
+        "uri_prefix_synonyms": [
+            "http://bioregistry.io/moid:",
+            "http://gnss-metadata.eu/MOID/",
+            "http://identifiers.org/moid/",
+            "http://identifiers.org/moid:",
+            "https://bioregistry.io/moid:",
+            "https://identifiers.org/moid/",
+            "https://identifiers.org/moid:"
+        ]
+    },
     {
         "pattern": "^(\\d{1,7}\\-\\d{2}\\-\\d)|([A-Za-z0-9\\+\\-\\_]+)$",
         "prefix": "molbase",
@@ -25111,6 +25123,15 @@
             "https://purl.uniprot.org/annotation/"
         ]
     },
+    {
+        "prefix": "uniprot.core",
+        "uri_prefix": "http://purl.uniprot.org/core/",
+        "uri_prefix_synonyms": [
+            "http://bioregistry.io/uniprot.core:",
+            "https://bioregistry.io/uniprot.core:",
+            "https://purl.uniprot.org/core/"
+        ]
+    },
     {
         "pattern": "^DI-\\d{5}$",
         "prefix": "uniprot.disease",