Fight with more CI tests

marrink-lab · Jan 29, 2024 · d7ce38f · d7ce38f
1 parent 806a0d1
commit d7ce38f
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Showing 3 changed files with 8 additions and 4 deletions.
diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
@@ -52,7 +52,7 @@ jobs:
         
     - name: Run pytest with codecoverage
       run: |
-        coverage run --source=vermouth $(which pytest) -vv vermouth --hypothesis-show-statistics
+        coverage run $(which pytest) -vv --hypothesis-show-statistics
         coverage report --omit='*/bin/pytest'
         
     - if: ${{ matrix.WITH_CODECOV }}

diff --git a/.github/workflows/run_tests.yml b/.github/workflows/run_tests.yml
@@ -53,7 +53,11 @@ jobs:
         pip install -r requirements-tests.txt
         
     - name: Run pytest with codecoverage
-      run:  pytest vermouth --cov=vermouth --cov-report=xml --hypothesis-show-statistics
+      run: |
+        coverage run $(which pytest) -vv --hypothesis-show-statistics
+        coverage report
+        coverage xml 
+
     - if: ${{ matrix.WITH_CODECOV }}
       name: Upload coverage codecov   
       uses: codecov/codecov-action@v3 

diff --git a/pyproject.toml b/pyproject.toml
@@ -12,5 +12,5 @@ python_files = "test_*.py"
 
 [tool.coverage.run]
 branch = true
-omit = ["vermouth/tests/*", "vermouth/redistributed/*"]
-
+omit = ["vermouth/tests/*", "vermouth/redistributed/*", '*/bin/pytest']
+source_pkgs = ["vermouth"]