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Prepare a tidy results file #17

Merged
merged 18 commits into from
Oct 30, 2023
Merged

Prepare a tidy results file #17

merged 18 commits into from
Oct 30, 2023

Commits on Oct 19, 2023

  1. Add tidy results module

    @adamjtaylor
    adamjtaylor committed Oct 19, 2023
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  2. Refactor and add results_tidy as tower report

    @adamjtaylor
    adamjtaylor committed Oct 19, 2023
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  3. linting

    @adamjtaylor
    adamjtaylor committed Oct 19, 2023
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  4. User slimmer pandas image for TIDY

    @adamjtaylor
    adamjtaylor committed Oct 19, 2023
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  5. Use ash for COLLECT in alpine container

    @adamjtaylor
    adamjtaylor committed Oct 19, 2023
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  6. Merge branch 'main' into tidy-results

    @adamjtaylor
    adamjtaylor committed Oct 19, 2023
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Commits on Oct 21, 2023

  1. use debian:trixie-slim container for collect

    @adamjtaylor
    adamjtaylor committed Oct 21, 2023
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  2. Move histoqc container into process

    @adamjtaylor
    adamjtaylor committed Oct 21, 2023
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  3. Update collect_results.nf

    @adamjtaylor
    adamjtaylor committed Oct 21, 2023
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  4. Update collect_results.nf

    @adamjtaylor
    adamjtaylor committed Oct 21, 2023
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Commits on Oct 22, 2023

  1. switch to ubuntu to collect

    @adamjtaylor
    adamjtaylor committed Oct 22, 2023
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  2. Merge branch 'tidy-results' of https://github.com/adamjtaylor/nf-histoqc 

     into tidy-results
    @adamjtaylor
    adamjtaylor committed Oct 22, 2023
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  3. Use biocontainers pandas

    @adamjtaylor
    adamjtaylor committed Oct 22, 2023
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  4. Fix quote

    @adamjtaylor
    adamjtaylor committed Oct 22, 2023
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  5. Specify biocontainers/pandas container version

    @adamjtaylor
    adamjtaylor committed Oct 22, 2023
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Commits on Oct 24, 2023

  1. Merge pull request #20 from mc2-center/main 

    Update branch from main
    @adamjtaylor
    adamjtaylor committed Oct 24, 2023
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  2. Add collection of error.log files

    @adamjtaylor
    adamjtaylor committed Oct 24, 2023
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  3. rename steps

    @adamjtaylor
    adamjtaylor committed Oct 24, 2023
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