working on #4024

fixing more synonym types
mgijax · Sep 4, 2024 · 81959a5 · 81959a5
1 parent 4eb0425
commit 81959a5
Showing 1 changed file with 9 additions and 9 deletions.
diff --git a/src/ontology/mp-edit.owl b/src/ontology/mp-edit.owl
@@ -69631,10 +69631,6 @@ SubClassOf(<http://purl.obolibrary.org/obo/MP_0005561> <http://purl.obolibrary.o
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:0-683-40008-8") Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "RGD:cur") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0005562> "less than the average levels of hemoglobin contained in an erythrocyte")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "decreased MCH")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "decreased mean corpuscular haemoglobin")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromasia")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromatism")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromia")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochrosis")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "low MCH")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "low mean corpuscular haemoglobin")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "low mean corpuscular hemoglobin")
@@ -69643,6 +69639,10 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynony
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0005562> "MPheno.ontology")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromic erythrocyte")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromic red cell")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromasia")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromatism")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochromia")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0005562> "hypochrosis")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0005562> "MP:0005562")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <http://purl.obolibrary.org/obo/MP_0005562> <http://purl.obolibrary.org/obo/mp-edit#Europhenome_Terms>)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <http://purl.obolibrary.org/obo/MP_0005562> <http://purl.obolibrary.org/obo/mp-edit#IMPC>)
@@ -71921,8 +71921,8 @@ SubClassOf(<http://purl.obolibrary.org/obo/MP_0006092> <http://purl.obolibrary.o
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0003-4606-0597>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0006093> "fusion of an artery and vein without an intervening capillary bed")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006093> "AVM")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006093> "arteriovenous fistula")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0006093> "MPheno.ontology")
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://www.compva.com/science/special-types-arteriovenous-malformation>) <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0006093> "arteriovenous fistula")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0006093> "MP:0006093")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0006093> "arteriovenous malformation")
 EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0006093> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0002002> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0001637>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0001638>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002503> <http://purl.obolibrary.org/obo/MPATH_70>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
@@ -72356,8 +72356,8 @@ SubClassOf(<http://purl.obolibrary.org/obo/MP_0006129> <http://purl.obolibrary.o
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0003-4606-0597>) Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "https://orcid.org/0000-0002-6490-7723") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0006130> "congenital closure of the pulmonary valve")
 AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/MP_0006130> <https://orcid.org/0000-0002-6490-7723>)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym> <http://purl.obolibrary.org/obo/MP_0006130> "pulmonary atresia")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/MP_0006130> "Fyler:1001")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006130> "pulmonary atresia")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006130> "pulmonic valve atresia")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006130> "right arterial valve atresia")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006130> "right semi-lunar valve atresia")
@@ -72543,8 +72543,8 @@ SubClassOf(<http://purl.obolibrary.org/obo/MP_0006148> ObjectSomeValuesFrom(<htt
 # Class: <http://purl.obolibrary.org/obo/MP_0006149> (decreased visual acuity)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0003-4606-0597>) Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "NCBI:matt") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0006149> "loss of visual acuity or ability to distinguish small details")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006149> "blurred vision")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0006149> "MPheno.ontology")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/MP_0006149> "blurred vision")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0006149> "MP:0006149")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0006149> "decreased visual acuity")
 SubClassOf(<http://purl.obolibrary.org/obo/MP_0006149> <http://purl.obolibrary.org/obo/MP_0011832>)
@@ -73259,8 +73259,8 @@ SubClassOf(<http://purl.obolibrary.org/obo/MP_0006222> <http://purl.obolibrary.o
 # Class: <http://purl.obolibrary.org/obo/MP_0006223> (optic nerve swelling)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0003-4606-0597>) Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "NCBI:matt") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0006223> "accumulation of an excessive amount of fluid in the optic nerve; usually associated with an increase in intraocular pressure")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006223> "papilledema")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0006223> "pseudopapilledema")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/MP_0006223> "papilledema")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/MP_0006223> "pseudopapilledema")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0006223> "MPheno.ontology")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0006223> "MP:0006223")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0006223> "optic nerve swelling")