add support for groups other than rank in plotAbundance #248
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6 errors and 6 warnings
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Run neurogenomics/rworkflows@master
'top' must be <= nrow(x)
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Run neurogenomics/rworkflows@master
'top' must be <= nrow(x)
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Run neurogenomics/rworkflows@master
R CMD check found ERRORs
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Run neurogenomics/rworkflows@master
The data contains more than 500 rows. The abundance plot cannot be created. Consider subsetting/agglomeration. (Check 'group' parameter)
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Run neurogenomics/rworkflows@master
Test failures
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Run neurogenomics/rworkflows@master
Process completed with exit code 1.
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The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-devel-r-4.4.1-results", "Windows-biocversion-devel-r-4.4.1-results".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Run neurogenomics/rworkflows@master
harfbuzz 9.0.0 is already installed and up-to-date.
To reinstall 9.0.0, run:
brew reinstall harfbuzz
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Run neurogenomics/rworkflows@master
fribidi 1.0.15 is already installed and up-to-date.
To reinstall 1.0.15, run:
brew reinstall fribidi
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Run neurogenomics/rworkflows@master
macOS's Gatekeeper has been disabled for this Cask
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Run neurogenomics/rworkflows@master
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
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The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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